Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P62814 | Atp6v1b2 | V-type proton ATPase subunit B, … | Mus musculus (Mouse) | 511 aa |
Protein Details: P62814 (Atp6v1b2)
Protein Information
| Accession | P62814 |
|---|---|
| Protein Names | V-type proton ATPase subunit B, brain isoform (V-ATPase subunit B 2) (Endomembrane proton pump 58 kDa subunit) (Vacuolar proton pump subunit B 2) |
| Gene Symbol | Atp6v1b2 |
| Organism | Mus musculus (Mouse) |
| Length | 511 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31311849 34200797 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MALRAMRGIV11NGAAPELPVP21TGGPMAGARE31QALAVSRNYL41SQPRLTYKTV
51-10051SGVNGPLVIL61DHVKFPRYAE71IVHLTLPDGT81KRSGQVLEVS91GSKAVVQVFE
101-150101GTSGIDAKKT111SCEFTGDILR121TPVSEDMLGR131VFNGSGKPID141RGPVVLAEDF
151-200151LDIMGQPINP161QCRIYPEEMI171QTGISAIDGM181NSIARGQKIP191IFSAAGLPHN
201-250201EIAAQICRQA211GLVKKSKDVV221DYSEENFAIV231FAAMGVNMET241ARFFKSDFEE
251-300251NGSMDNVCLF261LNLANDPTIE271RIITPRLALT281TAEFLAYQCE291KHVLVILTDM
301-350301SSYAEALREV311SAAREEVPGR321RGFPGYMYTD331LATIYERAGR341VEGRNGSITQ
351-400351IPILTMPNDD361ITHPIPDLTG371YITEGQIYVD381RQLHNRQIYP391PINVLPSLSR
401-450401LMKSAIGEGM411TRKDHADVSN421QLYACYAIGK431DVQAMKAVVG441EEALTSDDLL
451-500451YLEFLQKFEK461NFITQGPYEN471RTVYETLDIG481WQLLRIFPKE491MLKRIPQSTL
501-511501SEFYPRDSAK511H
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 112 | - |
Brain
(31311849)
MLE
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.83
Deep-Palm: 0.83
|
|
| 162 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.25
|
|
| 207 | SWISSPALM DBPTM CYSMODDB | - |
Brain
(31311849)
liver
(26165157)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.92
Deep-Palm: 0.97
|
| 258 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.24
|
|
| 289 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.96
|
|
| 425 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.73
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.833
5
Brain
Specificity: 0.132
5/5 (100.0%)
1
Liver
Specificity: 0.026
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
32
Brain tissue (Mass)
Specificity: 0.842
32/56 (57.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.