Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P62888 | RPL30 | Large ribosomal subunit protein eL30 … | Homo sapiens (Human) | 115 aa |
Protein Details: P62888 (RPL30)
Protein Information
| Accession | P62888 |
|---|---|
| Protein Names | Large ribosomal subunit protein eL30 (60S ribosomal protein L30) |
| Gene Symbol | RPL30 |
| Organism | Homo sapiens (Human) |
| Length | 115 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31251020 32944167 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MVAAKKTKKS11LESINSRLQL21VMKSGKYVLG31YKQTLKMIRQ41GKAKLVILAN
51-10051NCPALRKSEI61EYYAMLAKTG71VHHYSGNNIE81LGTACGKYYR91VCTLAIIDPG
101-115101DSDIIRSMPE111QTGEK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 52 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family |
SW480 cell line
(26865113)
HeLa
(37611173)
HeLa
(29575903)
|
cerebral cortex
(36430497)
Unknown
(32651440)
|
GPS-Palm: 0.96
Deep-Palm: 0.97
|
| 85 | - | - |
Unknown
(32651440)
|
GPS-Palm: 0.67
Deep-Palm: 0.34
|
|
| 92 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family |
HeLa
(29575903)
| - |
GPS-Palm: 0.89
Deep-Palm: 0.78
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.286
2
LNCaP
Specificity: 0.286
2/2 (100.0%)
2
HAP1 cell
Specificity: 0.286
2/2 (100.0%)
2
PC3
Specificity: 0.286
2/2 (100.0%)
1
293T cell
Specificity: 0.143
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.