Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P62897 | Cycs | Cytochrome c, somatic | Mus musculus (Mouse) | 105 aa |
Protein Details: P62897 (Cycs)
Protein Information
| Accession | P62897 |
|---|---|
| Protein Names | Cytochrome c, somatic |
| Gene Symbol | Cycs |
| Organism | Mus musculus (Mouse) |
| Length | 105 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGDVEKGKKI11FVQKCAQCHT21VEKGGKHKTG31PNLHGLFGRK41TGQAAGFSYT
51-10051DANKNKGITW61GEDTLMEYLE71NPKKYIPGTK81MIFAGIKKKG91ERADLIAYLK
101-105101KATNE
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 15 | SWISSPALM DBPTM CYSMODDB | Cytochrome c Cytochrome c, class IA/ IB Cytochrome c-like domain superfamily Cytochrome c-like domain |
liver
(26165157)
| - |
GPS-Palm: 0.76
Deep-Palm: 0.79
|
| 18 | Cytochrome c, class IA/ IB Cytochrome c-like domain superfamily Cytochrome c-like domain | - |
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.85
Deep-Palm: 0.88
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.400
4
Brain
Specificity: 0.222
4/4 (100.0%)
4
Liver
Specificity: 0.222
4/4 (100.0%)
2
Testis
Specificity: 0.111
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
8
Brain tissue (Mass)
Specificity: 0.444
8/56 (14.3%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.