Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P62956 | Cacng7 | Voltage-dependent calcium channel gamma-7 subunit … | Mus musculus (Mouse) | 275 aa |
Protein Details: P62956 (Cacng7)
Protein Information
| Accession | P62956 |
|---|---|
| Protein Names | Voltage-dependent calcium channel gamma-7 subunit (Neuronal voltage-gated calcium channel gamma-7 subunit) (Transmembrane AMPAR regulatory protein gamma-7) (TARP gamma-7) |
| Gene Symbol | Cacng7 |
| Organism | Mus musculus (Mouse) |
| Length | 275 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31772009 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSHCSSRALT11LLSSVFGACG21LLLVGIAVST31DYWLYMEEGT41VLPQNQTTEV
51-10051KMALHAGLWR61VCFFAGREKG71RCVASEYFLE81PEINLVTENT91ENILKTVRTA
101-150101TPFPMVSLFL111VFTAFVISNI121GHIRPQRTIL131AFVSGIFFIL141SGLSLVVGLV
151-200151LYISSINDEV161MNRPSSSEQY171FHYRYGWSFA181FAASSFLLKE191GAGVMSVYLF
201-250201TKRYAEEEMY211RPHPAFYRPR221LSDCSDYSGQ231FLQPEAWRRG241RSPSDISSDV
251-275251SIQMTQNYPP261AIKYPDHLHI271STSPC
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 4 | Prokaryotic membrane lipoprotein lipid attachment site profile. | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.04
|
|
| 19 | Prokaryotic membrane lipoprotein lipid attachment site profile. Voltage-dependent calcium channel gamma subunit | - | - |
Deep-Palm: 0.97
|
|
| 62 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.95
Deep-Palm: 0.93
|
|
| 72 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.79
|
|
| 224 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.62
|
| 275 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
GPS-Palm: 0.96
Deep-Palm: 0.01
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
NSC
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Brain tissue (Mass)
Specificity: 0.667
2/56 (3.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.