Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P63001 | Rac1 | Ras-related C3 botulinum toxin substrate … | Mus musculus (Mouse) | 192 aa |
Protein Details: P63001 (Rac1)
Protein Information
| Accession | P63001 |
|---|---|
| Protein Names | Ras-related C3 botulinum toxin substrate 1 (EC 3.6.5.2) (p21-Rac1) |
| Gene Symbol | Rac1 |
| Organism | Mus musculus (Mouse) |
| Length | 192 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34200797 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MQAIKCVVVG11DGAVGKTCLL21ISYTTNAFPG31EYIPTVFDNY41SANVMVDGKP
51-10051VNLGLWDTAG61QEDYDRLRPL71SYPQTDVFLI81CFSLVSPASF91ENVRAKWYPE
101-150101VRHHCPNTPI111ILVGTKLDLR121DDKDTIEKLK131EKKLTPITYP141QGLAMAKEIG
151-192151AVKYLECSAL161TQRGLKTVFD171EAIRAVLCPP181PVKKRKRKCL191LL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 6 | Ras family P-loop containing nucleoside triphosphate hydrolase Small GTPase |
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.92
Deep-Palm: 0.09
|
|
| 18 | Ras family P-loop containing nucleoside triphosphate hydrolase Transforming protein P21 ras signature Small GTPase Small GTPase Rho |
Brain
(31311849)
| - |
GPS-Palm: 0.76
Deep-Palm: 0.97
|
|
| 81 | - | - | - |
Deep-Palm: 0.95
|
|
| 105 | SWISSPALM DBPTM CYSMODDB | Ras family |
Liver
(28526873)
Brain
(31311849)
MLE
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.97
|
| 157 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Brain
(31311849)
MLE
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.93
Deep-Palm: 0.98
|
| 178 | SWISSPALM | - |
Brain
(31311849)
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.94
Deep-Palm: 0.98
|
| 189 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.545
6
Liver
Specificity: 0.133
6/6 (100.0%)
5
Brain
Specificity: 0.111
5/5 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
34
Brain tissue (Mass)
Specificity: 0.756
34/56 (60.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.