Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P63158 | Hmgb1; Hmg-1; Hmg1 | High mobility group protein B1 … | Mus musculus (Mouse) | 215 aa |
Protein Details: P63158 (Hmgb1)
Protein Information
| Accession | P63158 |
|---|---|
| Protein Names | High mobility group protein B1 (High mobility group protein 1) (HMG-1) |
| Gene Symbol | Hmgb1; Hmg-1; Hmg1 |
| Organism | Mus musculus (Mouse) |
| Length | 215 aa |
| Isoforms | No isoforms |
| Related PMIDs | 26165157 29733200 34884899 37925639 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.400
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
6
Liver tissue
Specificity: 0.400
6/19 (31.6%)
6
Liver membrane
Specificity: 0.400
6/6 (100.0%)
3
Brain tissue
Specificity: 0.200
3/12 (25.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Neural Stem Cells
Specificity: 0.000
0/3 (0.0%)
0
Testis
Specificity: 0.000
0/2 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MGKGDPKKPR11GKMSSYAFFV21QTCREEHKKK31HPDASVNFSE41FSKKCSERWK
51-10051TMSAKEKGKF61EDMAKADKAR71YEREMKTYIP81PKGETKKKFK91DPNAPKRPPS
101-150101AFFLFCSEYR111PKIKGEHPGL121SIGDVAKKLG131EMWNNTAADD141KQPYEKKAAK
151-200151LKEKYEKDIA161AYRAKGKPDA171AKKGVVKAEK181SKKKKEEEDD191EEDEEDEEEE
201-215201EEEEDEDEEE211DDDDE
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 23 | Prediction (Low) | - | - |
| 106 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | HMG (high mobility group) box | 26165157 |