Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P63242 | Eif5a | Eukaryotic translation initiation factor 5A-1 … | Mus musculus (Mouse) | 154 aa |
Protein Details: P63242 (Eif5a)
Protein Information
| Accession | P63242 |
|---|---|
| Protein Names | Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D) |
| Gene Symbol | Eif5a |
| Organism | Mus musculus (Mouse) |
| Length | 154 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 29575903 29733200 34200797 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MADDLDFETG11DAGASATFPM21QCSALRKNGF31VVLKGRPCKI41VEMSTSKTGK
51-10051HGHAKVHLVG61IDIFTGKKYE71DICPSTHNMD81VPNIKRNDFQ91LIGIQDGYLS
101-150101LLQDSGEVRE111DLRLPEGDLG121KEIEQKYDCG131EEILITVLSA141MTEEAAVAIK
151-154151AMAK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 22 | Translation initiation factor 5A-like, N-terminal Translation protein SH3-like domain superfamily Translation elongation factor IF5A-like Large ribosomal subunit protein uL2, domain 2 | - |
Brain
(35358180)
|
GPS-Palm: 0.77
Deep-Palm: 0.97
|
|
| 38 | Translation elongation factor, IF5A, hypusine site Translation initiation factor 5A-like, N-terminal Translation protein SH3-like domain superfamily Translation elongation factor IF5A-like Large ribosomal subunit protein uL2, domain 2 | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.93
|
|
| 73 | Translation initiation factor 5A-like N-terminal |
Brain
(34200797)
|
Brain
(35358180)
|
GPS-Palm: 0.70
Deep-Palm: 0.46
|
|
| 129 | SWISSPALM DBPTM CYSMODDB | Eukaryotic elongation factor 5A hypusine DNA-binding OB fold |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.308
4
Liver
Specificity: 0.095
4/4 (100.0%)
4
Brain
Specificity: 0.095
4/4 (100.0%)
3
Raw 264.7
Specificity: 0.071
3/3 (100.0%)
2
Testis
Specificity: 0.048
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.931
27
Brain tissue (Mass)
Specificity: 0.643
27/56 (48.2%)
2
Liver tissue (Mass)
Specificity: 0.048
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.