Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P70168 | Kpnb1 | Importin subunit beta-1 (Karyopherin subunit … | Mus musculus (Mouse) | 876 aa |
Protein Details: P70168 (Kpnb1)
Protein Information
| Accession | P70168 |
|---|---|
| Protein Names | Importin subunit beta-1 (Karyopherin subunit beta-1) (Nuclear factor p97) (Pore targeting complex 97 kDa subunit) (PTAC97) (SCG) |
| Gene Symbol | Kpnb1 |
| Organism | Mus musculus (Mouse) |
| Length | 876 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MELITILEKT11VSPDRLELEA21AQKFLERAAV31ENLPTFLVEL41SRVLANPGNS
51-10051QVARVAAGLQ61IKNSLTSKDP71DIKAQYQQRW81LAIDANARRE91VKNYVLQTLG
101-150101TETYRPSSAS111QCVAGIACAE121IPVSQWPELI131PQLVANVTNP141NSTEHMKEST
151-200151LEAIGYICQD161IDPEQLQDKS171NEILTAIIQG181MRKEEPSNNV191KLAATNALLN
201-250201SLEFTKANFD211KESERHFIMQ221VVCEATQCPD231TRVRVAALQN241LVKIMSLYYQ
251-300251YMETYMGPAL261FAITIEAMKS271DIDEVALQGI281EFWSNVCDEE291MDLAIEASEA
301-350301AEQGRPPEHT311SKFYAKGALQ321YLVPILTQTL331TKQDENDDDD341DWNPCKAAGV
351-400351CLMLLSTCCE361DDIVPHVLPF371IKEHIKNPDW381RYRDAAVMAF391GSILEGPEPN
401-450401QLKPLVIQAM411PTLIELMKDP421SVVVRDTTAW431TVGRICELLP441EAAINDVYLA
451-500451PLLQCLIEGL461SAEPRVASNV471CWAFSSLAEA481AYEAADVADD491QEEPATYCLS
501-550501SSFELIVQKL511LETTDRPDGH521QNNLRSSAYE531SLMEIVKNSA541KDCYPAVQKT
551-600551TLVIMERLQQ561VLQMESHIQS571TSDRIQFNDL581QSLLCATLQN591VLRKVQHQDA
601-650601LQISDVVMAS611LLRMFQSTAG621SGGVQEDALM631AVSTLVEVLG641GEFLKYMEAF
651-700651KPFLGIGLKN661YAEYQVCLAA671VGLVGDLCRA681LQSNILPFCD691EVMQLLLENL
701-750701GNENVHRSVK711PQILSVFGDI721ALAIGGEFKK731YLEVVLNTLQ741QASQAQVDKS
751-800751DFDMVDYLNE761LRESCLEAYT771GIVQGLKGDQ781ENVHPDVMLV791QPRVEFILSF
801-850801IDHIAGDEDH811TDGVVACAAG821LIGDLCTAFG831KDVLKLVEAR841PMIHELLTEG
851-876851RRSKTNKAKT861LATWATKELR871KLKNQA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 112 | - | - | - |
Deep-Palm: 0.71
|
|
| 118 | - | - | - |
Deep-Palm: 0.60
|
|
| 158 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.58
|
|
| 223 | - | - | - |
Deep-Palm: 0.88
|
|
| 228 | - | - | - |
Deep-Palm: 0.81
|
|
| 287 | - | - | - |
Deep-Palm: 0.47
|
|
| 345 | - | - | - |
Deep-Palm: 0.13
|
|
| 351 | - | - | - |
Deep-Palm: 0.09
|
|
| 358 | - | - | - |
Deep-Palm: 0.84
|
|
| 359 | - | - | - |
Deep-Palm: 0.83
|
|
| 436 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.89
|
|
| 455 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.97
|
|
| 471 | - | - | - |
Deep-Palm: 0.78
|
|
| 498 | - | - | - |
Deep-Palm: 0.90
|
|
| 543 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.88
|
|
| 585 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.91
|
|
| 667 | - | - | - |
Deep-Palm: 0.94
|
|
| 678 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.86
|
|
| 689 | - | - | - |
Deep-Palm: 0.94
|
|
| 765 | SWISSPALM DBPTM CYSMODDB | Importin subunit beta-1-like TPR repeats |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.67
Deep-Palm: 0.87
|
| 817 | - | - | - |
Deep-Palm: 0.91
|
|
| 826 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
6
Liver
Specificity: 0.273
6/6 (100.0%)
2
Brain
Specificity: 0.091
2/2 (100.0%)
2
Testis
Specificity: 0.091
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
12
Brain tissue (Mass)
Specificity: 0.545
12/56 (21.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.