Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P70280 | Vamp7 | Vesicle-associated membrane protein 7 (VAMP-7) … | Mus musculus (Mouse) | 220 aa |
Protein Details: P70280 (Vamp7)
Protein Information
| Accession | P70280 |
|---|---|
| Protein Names | Vesicle-associated membrane protein 7 (VAMP-7) (Synaptobrevin-like protein 1) |
| Gene Symbol | Vamp7 |
| Organism | Mus musculus (Mouse) |
| Length | 220 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 29575903 29660268 29733200 31772009 34884899 35358180 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAILFAVVAR11GTTILAKHAW21CGGNFLEVTE31QILAKIPSEN41NKLTYSHGNY
51-10051LFHYICQDRI61VYLCITDDDF71ERSRAFSFLN81EVKKRFQTTY91GSRAQTALPY
101-150101AMNSEFSSVL111AAQLKHHSEN121KSLDKVMETQ131AQVDELKGIM141VRNIDLVAQR
151-200151GERLELLIDK161TENLVDSSVT171FKTTSRNLAR181AMCMKNIKLT191IIIIIVSIVF
201-220201IYIIVSLLCG211GFTWPNCVKK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 21 | SWISSPALM DBPTM CYSMODDB | Synaptobrevin-like vesicular transport protein Longin domain Longin-like domain superfamily |
Liver
(28526873)
| - |
GPS-Palm: 0.73
Deep-Palm: 0.95
|
| 56 | - | - | - |
Deep-Palm: 0.04
|
|
| 64 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.08
|
|
| 183 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.90
|
|
| 209 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.02
|
|
| 217 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.375
6
Liver
Specificity: 0.375
6/6 (100.0%)
4
Raw 264.7
Specificity: 0.250
4/4 (100.0%)
3
Brain
Specificity: 0.188
3/3 (100.0%)
2
Testis
Specificity: 0.125
2/2 (100.0%)
1
NSC
Specificity: 0.062
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.