Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P70296 | Pebp1 | Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) … | Mus musculus (Mouse) | 187 aa |
Protein Details: P70296 (Pebp1)
Protein Information
| Accession | P70296 |
|---|---|
| Protein Names | Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)] |
| Gene Symbol | Pebp1 |
| Organism | Mus musculus (Mouse) |
| Length | 187 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34200797 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAADISQWAG11PLCLQEVDEP21PQHALRVDYA31GVTVDELGKV41LTPTQVMNRP
51-10051SSISWDGLDP61GKLYTLVLTD71PDAPSRKDPK81FREWHHFLVV91NMKGNDISSG
101-150101TVLSDYVGSG111PPSGTGLHRY121VWLVYEQEQP131LSCDEPILSN141KSGDNRGKFK
151-187151VETFRKKYNL161GAPVAGTCYQ171AEWDDYVPKL181YEQLSGK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 13 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Liver
(37925639)
Brain
(35358180)
|
Deep-Palm: 0.21
|
| 133 | - |
Brain
(34200797)
|
Brain
(35358180)
|
Deep-Palm: 0.72
|
|
| 168 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.91
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
6
Liver
Specificity: 0.120
6/6 (100.0%)
3
Brain
Specificity: 0.060
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.854
35
Brain tissue (Mass)
Specificity: 0.700
35/56 (62.5%)
6
Liver tissue (Mass)
Specificity: 0.120
6/8 (75.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.