Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P70398 | Usp9x | Ubiquitin carboxyl-terminal hydrolase 9X (EC … | Mus musculus (Mouse) | 2559 aa |
Protein Details: P70398 (Usp9x)
Protein Information
| Accession | P70398 |
|---|---|
| Protein Names | Ubiquitin carboxyl-terminal hydrolase 9X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X) |
| Gene Symbol | Usp9x |
| Organism | Mus musculus (Mouse) |
| Length | 2559 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 29733200 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MTATTRGSPV11GGNDNQGQAP21DGQSQPPLQQ31NQTSSPDSSN41ENSPATPPDE
51-10051QGQGDAPPQI61EDEEPAFPHT71DLAKLDDMIN81RPRWVVPVLP91KGELEVLLEA
101-150101AIDLSKKGLD111VKSEACQRFF121RDGLTISFTK131ILTDEAVSGW141KFEIHRCIIN
151-200151NTHRLVELCV161AKLAQDWFPL171LELLAMALNP181HCKFHIYNGT191RPCESVSSSV
201-250201QLPEDELFAR211SPDPRSPKGW221LVDLLNKFGT231LNGFQILHDR241FINGSALNVQ
251-300251IIAALIKPFG261QCYEFLTLHT271VKKYFLPIIE281MVPQFLENLT291DEELKKEAKN
301-350301EAKNDALSMI311IKSLKNLASR321VPGQEETVKN331LEIFRLKMIL341RLLQISSFNG
351-400351KMNALNEVNK361VISSVSYYTH371RHGSSEDEEW381LTAERMAEWI391QQNNILSIVL
401-450401RDSLHQPQYV411EKLEKILRFV421IKEKALTLQD431LDNIWAAQAG441KHEAIVKNVH
451-500451DLLAKLAWDF461SPEQLDHLFD471CFKASWTNAS481KKQREKLLEL491IRRLAEDDKD
501-550501GVMAHKVLNL511LWNLAHSDDV521PVDIMDLALS531AHIKILDYSC541SQDRDTQKIQ
551-600551WIDRFIEELR561TNDKWVIPAL571KQIREICSLF581GEAPQNLSQS591QRSPHVFYRH
601-650601DLINQLQHNH611ALVTLVAENL621ATYMESMRMY631GRDNEDYDPQ641TVRLGSRYSH
651-700651VQEVQERLNF661LRFLLKDGQL671WLCAPQAKQI681WKCLAENAVY691LCDREACFKW
701-750701YSKLMGDEPD711LDPDINKDFF721ESNVLQLDPS731LLTENGMKCF741ERFFKAVNCR
751-800751EGKLVAKRRA761YMMDDLELIG771LDYLWRVVIQ781SNDDIACRAI791DLLKEIYTNL
801-850801GPRLQVNQVV811IHEDFIQSCF821DRLKASYDTL831CVLDGDKDSI841NCARQEAVRM
851-900851VRVLTVLREY861INECDSDYHE871ERTILPMSRA881FRGKHLSFIV891RFPNQGRQVD
901-950901DLEVWSHTND911TIGSVRRCIL921NRIKANVAHT931KIELFVGGEL941IDPGDDRKLI
951-1000951GQLNLKDKSL961ITAKLTQISS971NMPSSPDSSS981DSSTGSPGNH991GNHYSDGPNP
1001-10501001EVESCLPGVI1011MSLHPRYISF1021LWQVADLGSS1031LNMPPLRDGA1041RVLMKLMPPD
1051-11001051STTIEKLRAI1061CLDHAKLGES1071SLSPSLDSLF1081FGPSASQVLY1091LTEVVYALLM
1101-11501101PAGAPLTDDS1111SDFQFHFLKS1121GGLPLVLSML1131TRNNFLPNAD1141METRRGAYLN
1151-12001151ALKIAKLLLT1161AIGYGHVRAV1171AEACQPGVEG1181VNPMTSVNQV1191THDQAVVLQS
1201-12501201ALQSIPNPSS1211ECMLRNVSVR1221LAQQISDEAS1231RYMPDICVIR1241AIQKIIWTSG
1251-13001251CGGLQLVFSP1261NEEVTKIYEK1271TNAGNEPDLE1281DEQVCCEALE1291VMTLCFALIP
1301-13501301TALDALSKEK1311AWQTFIIDLL1321LHCHSKTVRQ1331VAQEQFFLMC1341TRCCMGHRPL
1351-14001351LFFITLLFTV1361LGSTARERAK1371HSGDYFTLLR1381HLLNYAYNSN1391INVPNAEVLL
1401-14501401NNEIDWLKRI1411RDDVKRTGET1421GVEETILEGH1431LGVTKELLAF1441QTPEKKFHIG
1451-15001451CEKGGANLIK1461ELIDDFIFPA1471SNVYLQYMRN1481GELPAEQAIP1491VCGSPATINA
1501-15501501GFELLVALAV1511GCVRNLKQIV1521DSLTEMYYIG1531TAITTCEALT1541EWEYLPPVGP
1551-16001551RPPKGFVGLK1561NAGATCYMNS1571VIQQLYMIPS1581IRNGILAIEG1591TGSDVDDDMS
1601-16501601GDEKQDNESN1611VDPRDDVFGY1621PQQFEDKPPL1631SKTEDRKEYN1641IGVLRHLQVI
1651-17001651FGHLAASRLQ1661YYVPRGFWKQ1671FRLWGEPVNL1681REQHDALEFF1691NSLVDSLDEA
1701-17501701LKALGHPAML1711SKVLGGSFAD1721QKICQGCPHR1731YECEESFTTL1741NVDIRNHQNL
1751-18001751LDSLEQYVKG1761DLLEGANAYH1771CEKCNKKVDT1781VKRLLIKKLP1791PVLAIQLKRF
1801-18501801DYDWERECAI1811KFNDYFEFPR1821ELDMEPYTVA1831GVAKLEGDNV1841NPESQLIQQN
1851-19001851EQSESEKAGS1861TKYRLVGVLV1871HSGQASGGHY1881YSYIIQRNGG1891DGEKNRWYKF
1901-19501901DDGDVTECKM1911DDDEEMKNQC1921FGGEYMGEVF1931DHMMKRMSYR1941RQKRWWNAYI
1951-20001951LFYERMDTIG1961HDDEVIRYIS1971EIAITTRPHQ1981IVMPSAIERS1991VRKQNVQFMH
2001-20502001NRMQYSLEYF2011QFMKKLLTCN2021GVYLNPPPGQ2031DHLSPEAEEI2041TMISIQLAAR
2051-21002051FLFTTGFHTK2061KIVRGSASDW2071YDALCILLRH2081SKNVRFWFAH2091NVLFNVSNRF
2101-21502101SEYLLECPSA2111EVRGAFAKLI2121VFIAHFSLQD2131GPCPSPFASP2141GPSSQAYDNL
2151-22002151SLSDHLLRAV2161LNLLRREVSE2171HGRHLQQYFN2181LFVMYANLGV2191AEKTQLLKLS
2201-22502201VPATFMLVSL2211DEGPGPPIKY2221QYAELGKLYS2231VVSQLIRCCN2241VSSRMQSSIN
2251-23002251GNPSLPNPFG2261DPNLSQPIMP2271IQQNVVDILF2281VRTSYVKKII2291EDCSNSDETV
2301-23502301KLLRFCCWEN2311PQFSSTVLSE2321LLWQVAYSYT2331YELRPYLDLL2341LQILLIEDSW
2351-24002351QTHRIHNALK2361GIPDDRDGLF2371DTIQRSKNHY2381QKRAYQCIKC2391MVALFSSCPV
2401-24502401AYQILQGNGD2411LKRKWTWAVE2421WLGDELERRP2431YTGNPQYTYN2441NWSPPVQSNE
2451-25002451TSNGYFLERS2461HSARMTLAKA2471CELCPEEEPD2481DQDAPDEHES2491PPPEDAPLYP
2501-25502501HSPGSQYQQN2511NHVHGQPYTG2521PAAHHMNNPQ2531RTGQRAQENY2541EGGEEVSPPQ
2551-25592551TKGSVKCTY
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 116 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.97
|
|
| 147 | - | - | - |
Deep-Palm: 0.33
|
|
| 159 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.84
|
|
| 182 | - | - | - |
GPS-Palm: 0.65
Deep-Palm: 0.61
|
|
| 193 | - | - | - |
Deep-Palm: 0.18
|
|
| 262 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.71
|
|
| 471 | - | - | - |
Deep-Palm: 0.71
|
|
| 540 | - | - | - |
Deep-Palm: 0.60
|
|
| 577 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.90
|
|
| 673 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.93
|
|
| 683 | - | - | - |
Deep-Palm: 0.61
|
|
| 692 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.81
|
|
| 697 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.91
|
|
| 739 | - | - | - |
Deep-Palm: 0.94
|
|
| 749 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.79
|
|
| 787 | - | - | - |
GPS-Palm: 0.65
Deep-Palm: 0.39
|
|
| 819 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.38
|
|
| 831 | - | - | - |
Deep-Palm: 0.71
|
|
| 842 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.86
|
|
| 864 | - | - | - |
Deep-Palm: 0.43
|
|
| 918 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.62
|
|
| 1005 | - | - | - |
Deep-Palm: 0.34
|
|
| 1061 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.97
|
|
| 1174 | - | - | - |
Deep-Palm: 0.79
|
|
| 1212 | - | - | - |
Deep-Palm: 0.92
|
|
| 1237 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.43
|
|
| 1251 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.76
|
|
| 1285 | - | - | - |
Deep-Palm: 0.47
|
|
| 1286 | - | - | - |
Deep-Palm: 0.34
|
|
| 1295 | - | - | - |
Deep-Palm: 0.94
|
|
| 1323 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.76
|
|
| 1340 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.49
|
| 1343 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.55
|
|
| 1344 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.41
|
|
| 1451 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.94
|
|
| 1492 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.79
|
|
| 1512 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.89
|
|
| 1536 | - | - | - |
Deep-Palm: 0.40
|
|
| 1566 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.39
|
|
| 1724 | - | - | - |
Deep-Palm: 0.11
|
|
| 1727 | - | - | - |
Deep-Palm: 0.06
|
|
| 1733 | - | - | - |
Deep-Palm: 0.04
|
|
| 1771 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.61
|
|
| 1774 | - | - | - |
Deep-Palm: 0.72
|
|
| 1808 | - | - | - |
Deep-Palm: 0.12
|
|
| 1908 | - | - | - |
Deep-Palm: 0.04
|
|
| 1920 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.02
|
|
| 2019 | - | - | - |
Deep-Palm: 0.57
|
|
| 2075 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.78
|
|
| 2107 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.91
|
|
| 2133 | - | - | - |
Deep-Palm: 0.66
|
|
| 2238 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.89
|
|
| 2239 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.76
|
|
| 2293 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.53
|
|
| 2306 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.47
|
|
| 2307 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.55
|
|
| 2387 | - | - | - |
Deep-Palm: 0.12
|
|
| 2390 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.15
|
|
| 2398 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.62
|
|
| 2471 | - | - | - |
Deep-Palm: 0.88
|
|
| 2474 | - | - | - |
Deep-Palm: 0.71
|
|
| 2557 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.375
3
Brain
Specificity: 0.214
3/3 (100.0%)
3
Liver
Specificity: 0.214
3/3 (100.0%)
2
Testis
Specificity: 0.143
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Brain tissue (Mass)
Specificity: 0.429
6/56 (10.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.