Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P70404 | Idh3g | Isocitrate dehydrogenase [NAD] subunit gamma … | Mus musculus (Mouse) | 393 aa |
Protein Details: P70404 (Idh3g)
Protein Information
| Accession | P70404 |
|---|---|
| Protein Names | Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial (Isocitric dehydrogenase subunit gamma) (NAD(+)-specific ICDH subunit gamma) |
| Gene Symbol | Idh3g |
| Organism | Mus musculus (Mouse) |
| Length | 393 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34200797 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MALKVAIAAG11GAAKAMLKPT21LLCRPWEVLA31AHVAPRRSIS41SQQTIPPSAK
51-10051YGGRHTVTMI61PGDGIGPELM71LHVKSVFRHA81CVPVDFEEVH91VSSNADEEDI
101-150101RNAIMAIRRN111RVALKGNIET121NHNLPPSHKS131RNNILRTSLD141LYANVIHCKS
151-200151LPGVVTRHKD161IDILIVRENT171EGEYSSLEHE181SVAGVVESLK191IITKAKSLRI
201-250201AEYAFKLAQE211SGRKKVTAVH221KANIMKLGDG231LFLQCCREVA241AHYPQITFDS
251-300251MIVDNTTMQL261VSRPQQFDVM271VMPNLYGNIV281NNVCAGLVGG291PGLVAGANYG
301-350301HVYAVFETAT311RNTGKSIANK321NIANPTATLL331ASCMMLDHLK341LHSYATSIRK
351-393351AVLASMDNEN361MHTPDIGGQG371TTSQAIQDII381RHIRIINGRA391VEA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 23 | - | - | - |
Deep-Palm: 0.98
|
|
| 81 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Brain
(31311849)
|
Brain
(35358180)
|
Deep-Palm: 0.74
|
| 148 | SWISSPALM DBPTM CYSMODDB | Isocitrate/isopropylmalate dehydrogenase |
Brain
(31311849)
liver
(26165157)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.86
|
| 235 | SWISSPALM DBPTM CYSMODDB | Isocitrate/isopropylmalate dehydrogenase |
Brain
(34200797)
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.92
Deep-Palm: 0.72
|
| 236 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.66
|
|
| 284 | - | - | - |
Deep-Palm: 0.91
|
|
| 333 | SWISSPALM DBPTM CYSMODDB | Isocitrate/isopropylmalate dehydrogenase |
Liver
(28526873)
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.94
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.556
5
Brain
Specificity: 0.119
5/5 (100.0%)
4
Liver
Specificity: 0.095
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
33
Brain tissue (Mass)
Specificity: 0.786
33/56 (58.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.