Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P70697 | Urod | Uroporphyrinogen decarboxylase (UPD) (URO-D) (EC … | Mus musculus (Mouse) | 367 aa |
Protein Details: P70697 (Urod)
Protein Information
| Accession | P70697 |
|---|---|
| Protein Names | Uroporphyrinogen decarboxylase (UPD) (URO-D) (EC 4.1.1.37) |
| Gene Symbol | Urod |
| Organism | Mus musculus (Mouse) |
| Length | 367 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MEANGFGLQN11FPELKNDTFL21RAAWGEETDY31TPVWCMRQAG41RYLPEFRETR
51-10051AAQDFFSTCR61SPEACCELTL71QPLRRFPLDA81AIIFSDILVV91PQALGMEVTM
101-150101VPGKGPSFPE111PLREERDLER121LRDPAAAASE131LGYVFQAITL141TRQRLAGRVP
151-200151LIGFAGAPWT161LMTYMVEGGS171SSTMAQAKRW181LYQRPQASHK191LLGILTDVLV
201-250201PYLIGQVAAG211AQALQLFESH221AGHLGTELFS231KFALPYIRDV241AKRVKAGLQK
251-300251AGLAPVPMII261FAKDGHFALE271ELAQAGYEVV281GLDWTVAPKK291ARERVGKAVT
301-350301LQGNLDPCAL311YASEEEIGRL321VQQMLDDFGP331QRYIANLGHG341LYPDMDPERV
351-367351GAFVDAVHKH361SRLLRQN
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 35 | SWISSPALM DBPTM CYSMODDB | Uroporphyrinogen decarboxylase (URO-D) UROD/MetE-like superfamily METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED |
Liver
(28526873)
| - |
GPS-Palm: 0.84
Deep-Palm: 0.94
|
| 59 | SWISSPALM DBPTM CYSMODDB | Uroporphyrinogen decarboxylase (URO-D) |
Liver
(28526873)
| - |
GPS-Palm: 0.83
Deep-Palm: 0.93
|
| 65 | SWISSPALM DBPTM CYSMODDB | Uroporphyrinogen decarboxylase (URO-D) |
Liver
(28526873)
| - |
GPS-Palm: 0.79
Deep-Palm: 0.97
|
| 66 | SWISSPALM DBPTM CYSMODDB | Uroporphyrinogen decarboxylase (URO-D) |
Liver
(28526873)
| - |
GPS-Palm: 0.89
Deep-Palm: 0.98
|
| 308 | - | - | - |
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
Liver
Specificity: 0.600
3/3 (100.0%)
2
Testis
Specificity: 0.400
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.