Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P80313 | Cct7 | T-complex protein 1 subunit eta … | Mus musculus (Mouse) | 544 aa |
Protein Details: P80313 (Cct7)
Protein Information
| Accession | P80313 |
|---|---|
| Protein Names | T-complex protein 1 subunit eta (TCP-1-eta) (EC 3.6.1.-) (CCT-eta) |
| Gene Symbol | Cct7 |
| Organism | Mus musculus (Mouse) |
| Length | 544 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MMPTPVILLK11EGTDSSQGIP21QLVSNISACQ31VIAEAVRTTL41GPRGMDKLIV
51-10051DGRGKATISN61DGATILKLLD71VVHPAAKTLV81DIAKSQDAEV91GDGTTSVTLL
101-150101AAEFLKQVKP111YVEEGLHPQI121IIRAFRTATQ131LAVNKIKEIA141VTVKKQDKVE
151-200151QRKMLEKCAM161TALSSKLISQ171QKVFFAKMVV181DAVMMLDELL191QLKMIGIKKV
201-250201QGGALEESQL211VAGVAFKKTF221SYAGFEMQPK231KYKNPKIALL241NVELELKAEK
251-300251DNAEIRVHTV261EDYQAIVDAE271WNILYDKLEK281IHQSGAKVIL291SKLPIGDVAT
301-350301QYFADRDMFC311AGRVPEEDLK321RTMMACGGSI331QTSVNALVPD341VLGHCQVFEE
351-400351TQIGGERYNF361FTGCPKAKTC371TIILRGGAEQ381FMEETERSLH391DAIMIVRRAI
401-450401KNDSVVAGGG411AIEMELSKYL421RDYSRTIPGK431QQLLIGAYAK441ALEIIPRQLC
451-500451DNAGFDATNI461LNKLRARHAQ471GGMWYGVDIN481NENIADNFQA491FVWEPAMVRI
501-544501NALTAASEAA511CLIVSVDETI521KNPRSTVDPP531APSAGRGRGQ541ARFH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 29 | GroEL-like equatorial domain superfamily |
Brain
(34200797)
|
Brain
(35358180)
|
GPS-Palm: 0.92
Deep-Palm: 0.97
|
|
| 158 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.89
|
|
| 310 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.69
Deep-Palm: 0.90
|
|
| 326 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.97
|
|
| 345 | - | - | - |
Deep-Palm: 0.67
|
|
| 364 | SWISSPALM DBPTM CYSMODDB | TCP-1/cpn60 chaperonin family |
brain
(39008777)
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.94
Deep-Palm: 0.88
|
| 370 | SWISSPALM DBPTM CYSMODDB | TCP-1/cpn60 chaperonin family |
Brain
(31311849)
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.94
Deep-Palm: 0.71
|
| 450 | - | - |
Liver
(34884899)
Brain
(35358180)
|
GPS-Palm: 0.83
Deep-Palm: 0.92
|
|
| 511 | SWISSPALM DBPTM CYSMODDB | TCP-1/cpn60 chaperonin family |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.87
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.462
6
Liver
Specificity: 0.214
6/6 (100.0%)
5
Brain
Specificity: 0.179
5/5 (100.0%)
2
Testis
Specificity: 0.071
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
15
Brain tissue (Mass)
Specificity: 0.536
15/56 (26.8%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.