Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P80314 | Cct2 | T-complex protein 1 subunit beta … | Mus musculus (Mouse) | 535 aa |
Protein Details: P80314 (Cct2)
Protein Information
| Accession | P80314 |
|---|---|
| Protein Names | T-complex protein 1 subunit beta (TCP-1-beta) (EC 3.6.1.-) (CCT-beta) |
| Gene Symbol | Cct2 |
| Organism | Mus musculus (Mouse) |
| Length | 535 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASLSLAPVN11IFKAGADEER21AETARLSSFI31GAIAIGDLVK41STLGPKGMDK
51-10051ILLSSGRDAA61LMVTNDGATI71LKNIGVDNPA81AKVLVDMSRV91QDDEVGDGTT
101-150101SVTVLAAELL111REAESLIAKK121IHPQTIISGW131REATKAAREA141LLSSAVDHGS
151-200151DEARFWQDLM161NIAGTTLSSK171LLTHHKDHFT181KLAVEAVLRL191KGSGNLEAIH
201-250201VIKKLGGSLA211DSYLDEGFLL221DKKIGVNQPK231RIENAKILIA241NTGMDTDKIK
251-300251IFGSRVRVDS261TAKVAEIEHA271EKEKMKEKVE281RILKHGINCF291INRQLIYNYP
301-350301EQLFGAAGVM311AIEHADFAGV321ERLALVTGGE331IASTFDHPEL341VKLGSCKLIE
351-400351EVMIGEDKLI361HFSGVALGEA371CTIVLRGATQ381QILDEAERSL391HDALCVLAQT
401-450401VKDPRTVYGG411GCSEMLMAHA421VTQLANRTPG431KEAVAMESFA441KALRMLPTII
451-500451ADNAGYDSAD461LVAQLRAAHS471EGHITAGLDM481KEGTIGDMAV491LGITESFQVK
501-535501RQVLLSAAEA511AEVILRVDNI521IKAAPRKRVP531DHHPC
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 289 | SWISSPALM DBPTM CYSMODDB | TCP-1/cpn60 chaperonin family |
Liver
(28526873)
| - |
GPS-Palm: 0.91
Deep-Palm: 0.91
|
| 346 | - | - | - |
Deep-Palm: 0.96
|
|
| 371 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.97
|
|
| 395 | SWISSPALM DBPTM CYSMODDB | TCP-1/cpn60 chaperonin family |
liver
(26165157)
Liver
(28526873)
| - |
GPS-Palm: 0.83
Deep-Palm: 0.97
|
| 412 | SWISSPALM DBPTM CYSMODDB | TCP-1/cpn60 chaperonin family |
liver
(26165157)
|
Brain
(35358180)
|
Deep-Palm: 0.84
|
| 535 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.714
5
Liver
Specificity: 0.385
5/5 (100.0%)
2
Brain
Specificity: 0.154
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Brain tissue (Mass)
Specificity: 0.462
6/56 (10.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.