Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P80315 | Cct4 | T-complex protein 1 subunit delta … | Mus musculus (Mouse) | 539 aa |
Protein Details: P80315 (Cct4)
Protein Information
| Accession | P80315 |
|---|---|
| Protein Names | T-complex protein 1 subunit delta (TCP-1-delta) (EC 3.6.1.-) (A45) (CCT-delta) |
| Gene Symbol | Cct4 |
| Organism | Mus musculus (Mouse) |
| Length | 539 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 29733200 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPENVASRSG11APTAGPGSRG21KSAYQDRDKP31AQIRFSNISA41AKAVADAIRT
51-10051SLGPKGMDKM61IQDGKGDVTI71TNDGATILKQ81MQVLHPAARM91LVELSKAQDI
101-150101EAGDGTTSVV111IIAGSLLDSC121TKLLQKGIHP131TIISESFQKA141LEKGLEILTD
151-200151MSRPVQLSDR161ETLLNSATTS171LNSKVVSQYS181SLLSPMSVNA191VMKVIDPATA
201-250201TSVDLRDIKI211VKKLGGTIDD221CELVEGLVLT231QKVANSGITR241VEKAKIGLIQ
251-300251FCLSAPKTDM261DNQIVVSDYA271QMDRVLREER281AYILNLVKQI291KKTGCNVLLI
301-350301QKSILRDALS311DLALHFLNKM321KIMVVKDVER331EDIEFICKTI341GTKPVAHIDQ
351-400351FTADMLGSAE361LAEEVSLNGS371GKLFKITGCT381SPGKTVTIVV391RGSNKLVIEE
401-450401AERSIHDALC411VIRCLVKKRA421LIAGGGAPEI431ELALRLTEYS441RTLSGMESYC
451-500451VRAFADAMEV461IPSTLAENAG471LNPISTVTEL481RNRHAQGEKT491TGINVRKGGI
501-539501SNILEEMVVQ511PLLVSVSALT521LATETVRSIL531KIDDVVNTR
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 120 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.92
|
|
| 221 | - | - |
Liver
(34884899)
Brain
(35358180)
|
GPS-Palm: 0.86
Deep-Palm: 0.98
|
|
| 252 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.95
Deep-Palm: 0.96
|
| 295 | SWISSPALM DBPTM CYSMODDB | TCP-1/cpn60 chaperonin family |
Liver
(28526873)
| - |
GPS-Palm: 0.95
Deep-Palm: 0.97
|
| 337 | - | - | - |
Deep-Palm: 0.61
|
|
| 379 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.95
|
|
| 410 | SWISSPALM DBPTM CYSMODDB | TCP-1/cpn60 chaperonin family |
Liver
(28526873)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.97
|
| 414 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.97
|
|
| 450 | SWISSPALM DBPTM CYSMODDB | TCP-1/cpn60 chaperonin family |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.90
Deep-Palm: 0.73
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.462
6
Liver
Specificity: 0.250
6/6 (100.0%)
5
Brain
Specificity: 0.208
5/5 (100.0%)
2
Testis
Specificity: 0.083
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
11
Brain tissue (Mass)
Specificity: 0.458
11/56 (19.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.