Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P80316 | Cct5 | T-complex protein 1 subunit epsilon … | Mus musculus (Mouse) | 541 aa |
Protein Details: P80316 (Cct5)
Protein Information
| Accession | P80316 |
|---|---|
| Protein Names | T-complex protein 1 subunit epsilon (TCP-1-epsilon) (EC 3.6.1.-) (CCT-epsilon) |
| Gene Symbol | Cct5 |
| Organism | Mus musculus (Mouse) |
| Length | 541 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 29733200 31311849 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASVGTLAFD11EYGRPFLIIK21DQDRKSRLMG31LEALKSHIMA41AKAVANTMRT
51-10051SLGPNGLDKM61MVDKDGDVTI71TNDGATILSM81MDVDHQIAKL91MVELSKSQDD
101-150101EIGDGTTGVV111VLAGALLEEA121EQLLDRGIHP131IRIADGYEQA141ARIAIQHLDK
151-200151ISDKVLVDIN161NPEPLIQTAK171TTLGSKVINS181CHRQMAEIAV191NAVLTVADME
201-250201RRDVDFELIK211VEGKVGGRLE221DTKLIKGVIV231DKDFSHPQMP241KKVVDAKIAI
251-300251LTCPFEPPKP261KTKHKLDVMS271VEDYKALQKY281EKEKFEEMIK291QIKETGANLA
301-350301ICQWGFDDEA311NHLLLQNGLP321AVRWVGGPEI331ELIAIATGGR341IVPRFSELTS
351-400351EKLGFAGVVQ361EISFGTTKDK371MLVIEKCKNS381RAVTIFIRGG391NKMIIEEAKR
401-450401SLHDALCVIR411NLIRDNRVVY421GGGAAEISCA431LAVSQEADKC441PTLEQYAMRA
451-500451FADALEVIPM461ALSENSGMNP471IQTMTEVRAR481QVKESNPALG491IDCLHKGSND
501-541501MQYQHVIETL511IGKKQQISLA521TQMVRMILKI531DDIRKPGESE541E
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 181 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.79
|
|
| 253 | SWISSPALM DBPTM CYSMODDB | TCP-1/cpn60 chaperonin family |
Liver
(28526873)
Brain
(31311849)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.92
Deep-Palm: 0.96
|
| 302 | SWISSPALM DBPTM CYSMODDB | TCP-1/cpn60 chaperonin family |
Forebrain
(28680068)
|
Liver
(34884899)
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.91
|
| 377 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.83
|
|
| 407 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.92
|
|
| 429 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.73
Deep-Palm: 0.83
|
|
| 440 | - | - | - |
Deep-Palm: 0.92
|
|
| 493 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.67
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.429
6
Liver
Specificity: 0.171
6/6 (100.0%)
6
Brain
Specificity: 0.171
6/6 (100.0%)
2
Testis
Specificity: 0.057
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
21
Brain tissue (Mass)
Specificity: 0.600
21/56 (37.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.