Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P80318 | Cct3 | T-complex protein 1 subunit gamma … | Mus musculus (Mouse) | 545 aa |
Protein Details: P80318 (Cct3)
Protein Information
| Accession | P80318 |
|---|---|
| Protein Names | T-complex protein 1 subunit gamma (TCP-1-gamma) (EC 3.6.1.-) (CCT-gamma) (Matricin) (mTRiC-P5) |
| Gene Symbol | Cct3 |
| Organism | Mus musculus (Mouse) |
| Length | 545 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 29733200 31311849 34200797 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MMGHRPVLVL11SQNTKRESGR21KVQSGNINAA31KTIADIIRTC41LGPKSMMKML
51-10051LDPMGGIVMT61NDGNAILREI71QVQHPAAKSM81IEISRTQDEE91VGDGTTSVII
101-150101LAGEMLSVAE111HFLEQQMHPT121VVISAYRMAL131DDMISTLKKI141STPVDVNNRE
151-200151MMLSIINSSI161TTKVISRWSS171LACNIALDAV181KTVQFEENGR191KEIDIKKYAR
201-250201VEKIPGGIIE211DSCVLRGVMI221NKDVTHPRMR231RYIKNPRIVL241LDSSLEYKKG
251-300251ESQTDIEITR261EEDFTRILQM271EEEYIHQLCE281DIIQLKPDVV291ITEKGISDLA
301-350301QHYLMRANVT311AIRRVRKTDN321NRIARACGAR331IVSRPEELRE341DDVGTGAGLL
351-400351EIKKIGDEYF361TFITDCKDPK371ACTILLRGAS381KEILSEVERN391LQDAMQVCRN
401-450401VLLDPQLVPG411GGASEMAVAH421ALTEKSKAMT431GVEQWPYRAV441AQALEVIPRT
451-500451LIQNCGASTI461RLLTSLRAKH471TQESCETWGV481NGETGTLVDM491KELGIWEPLA
501-545501VKLQTYKTAV511ETAVLLLRID521DIVSGHKKKG531DDQNRQTGAP541DAGQE
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 40 | GroEL-like equatorial domain superfamily Chaperone tailless complex polypeptide 1 (TCP-1) Chaperonin Cpn60/GroEL/TCP-1 family | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.94
|
|
| 173 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.90
Deep-Palm: 0.86
|
| 213 | TCP-1/cpn60 chaperonin family |
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.74
Deep-Palm: 0.82
|
|
| 279 | - | - | - |
Deep-Palm: 0.71
|
|
| 327 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.97
|
|
| 366 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.72
Deep-Palm: 0.91
|
|
| 372 | TCP-1/cpn60 chaperonin family |
Brain
(31311849)
|
Brain
(35358180)
|
GPS-Palm: 0.89
Deep-Palm: 0.53
|
|
| 398 | SWISSPALM DBPTM CYSMODDB | TCP-1/cpn60 chaperonin family |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.89
Deep-Palm: 0.97
|
| 455 | SWISSPALM DBPTM CYSMODDB | TCP-1/cpn60 chaperonin family |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.94
Deep-Palm: 0.96
|
| 475 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.95
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
6
Liver
Specificity: 0.171
6/6 (100.0%)
5
Brain
Specificity: 0.143
5/5 (100.0%)
1
Raw 264.7
Specificity: 0.029
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
23
Brain tissue (Mass)
Specificity: 0.657
23/56 (41.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.