Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P80404 | ABAT; GABAT | 4-aminobutyrate aminotransferase, mitochondrial (EC 2.6.1.19) … | Homo sapiens (Human) | 500 aa |
Protein Details: P80404 (ABAT)
Protein Information
| Accession | P80404 |
|---|---|
| Protein Names | 4-aminobutyrate aminotransferase, mitochondrial (EC 2.6.1.19) ((S)-3-amino-2-methylpropionate transaminase) (EC 2.6.1.22) (GABA aminotransferase) (GABA-AT) (Gamma-amino-N-butyrate transaminase) (GABA transaminase) (GABA-T) (L-AIBAT) |
| Gene Symbol | ABAT; GABAT |
| Organism | Homo sapiens (Human) |
| Length | 500 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 33636221 36430497 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.737
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
14
LNCaP cells
Specificity: 0.737
14/46 (30.4%)
4
Cerebral cortex
Specificity: 0.211
4/4 (100.0%)
1
Liver membrane
Specificity: 0.053
1/1 (100.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
PC3 cells
Specificity: 0.000
0/4 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MASMLLAQRL11ACSFQHSYRL21LVPGSRHISQ31AAAKVDVEFD41YDGPLMKTEV
51-10051PGPRSQELMK61QLNIIQNAEA71VHFFCNYEES81RGNYLVDVDG91NRMLDLYSQI
101-150101SSVPIGYSHP111ALLKLIQQPQ121NASMFVNRPA131LGILPPENFV141EKLRQSLLSV
151-200151APKGMSQLIT161MACGSCSNEN171ALKTIFMWYR181SKERGQRGFS191QEELETCMIN
201-250201QAPGCPDYSI211LSFMGAFHGR221TMGCLATTHS231KAIHKIDIPS241FDWPIAPFPR
251-300251LKYPLEEFVK261ENQQEEARCL271EEVEDLIVKY281RKKKKTVAGI291IVEPIQSEGG
301-350301DNHASDDFFR311KLRDIARKHG321CAFLVDEVQT331GGGCTGKFWA341HEHWGLDDPA
351-400351DVMTFSKKMM361TGGFFHKEEF371RPNAPYRIFN381TWLGDPSKNL391LLAEVINIIK
401-450401REDLLNNAAH411AGKALLTGLL421DLQARYPQFI431SRVRGRGTFC441SFDTPDDSIR
451-500451NKLILIARNK461GVVLGGCGDK471SIRFRPTLVF481RDHHAHLFLN491IFSDILADFK
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 12 | Prediction (Medium) | - | - |
| 163 | Prediction (Low) | - | - |
| 166 | Prediction (Medium) | - | - |
| 224 | Prediction (High) | - | - |
| 321 | Prediction (Medium) | - | - |
| 440 | Prediction (Medium) | - | - |
| 467 | Prediction (High) | - | - |
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 25 | S → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 223 | G → C | 0.001764 | SNP | Missense Mutation | LUAD |