Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P83882 | Rpl36a | Large ribosomal subunit protein eL42 … | Mus musculus (Mouse) | 106 aa |
Protein Details: P83882 (Rpl36a)
Protein Information
| Accession | P83882 |
|---|---|
| Protein Names | Large ribosomal subunit protein eL42 (60S ribosomal protein L36a) (60S ribosomal protein L44) |
| Gene Symbol | Rpl36a |
| Organism | Mus musculus (Mouse) |
| Length | 106 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MVNVPKTRRT11FCKKCGKHQP21HKVTQYKKGK31DSLYAQGKRR41YDRKQSGYGG
51-10051QTKPIFRKKA61KTTKKIVLRL71ECVEPNCRSK81RMLAIKRCKH91FELGGDKKRK
101-106101GQVIQF
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 12 | Zinc-binding ribosomal protein Eukaryotic Ribosomal Large Subunit eL42 Large ribosomal subunit protein eL42 |
brain
(39008777)
| - |
GPS-Palm: 0.83
Deep-Palm: 0.02
|
|
| 15 | Ribosomal protein L44 Large ribosomal subunit protein eL42 Zinc-binding ribosomal protein Eukaryotic Ribosomal Large Subunit eL42 |
brain
(39008777)
| - |
GPS-Palm: 0.81
Deep-Palm: 0.08
|
|
| 72 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein L44 |
MLE
(39008777)
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.88
Deep-Palm: 0.97
|
| 77 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein L44 |
MLE
(39008777)
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.90
|
| 88 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein L44 |
liver
(26165157)
MLE
(39008777)
| - |
GPS-Palm: 0.91
Deep-Palm: 0.91
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.800
4
Liver
Specificity: 0.182
4/4 (100.0%)
1
Brain
Specificity: 0.045
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
17
Brain tissue (Mass)
Specificity: 0.773
17/56 (30.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.