Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P84077 | ARF1 | ADP-ribosylation factor 1 (EC 3.6.5.2) | Homo sapiens (Human) | 181 aa |
Protein Details: P84077 (ARF1)
Protein Information
| Accession | P84077 |
|---|---|
| Protein Names | ADP-ribosylation factor 1 (EC 3.6.5.2) |
| Gene Symbol | ARF1 |
| Organism | Homo sapiens (Human) |
| Length | 181 aa |
| Isoforms | No isoforms |
| Related PMIDs | 19137006 31251020 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGNIFANLFK11GLFGKKEMRI21LMVGLDAAGK31TTILYKLKLG41EIVTTIPTIG
51-10051FNVETVEYKN61ISFTVWDVGG71QDKIRPLWRH81YFQNTQGLIF91VVDSNDRERV
101-150101NEAREELMRM111LAEDELRDAV121LLVFANKQDL131PNAMNAAEIT141DKLGLHSLRH
151-181151RNWYIQATCA161TSGDGLYEGL171DWLSNQLRNQ181K
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 159 | - | - | - |
Deep-Palm: 0.76
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
LNCaP
Specificity: 0.667
2/2 (100.0%)
1
Jurkat T cell
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 19 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 19 | R → C | 0.003460 | SNP | Missense Mutation | CESC |
| 79 | R → C | 0.002020 | SNP | Missense Mutation | PRAD |
| 79 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |