Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P84244 | H3-3a;; H3-3b | Histone H3.3 | Mus musculus (Mouse) | 136 aa |
Protein Details: P84244 (H3-3a)
Protein Information
| Accession | P84244 |
|---|---|
| Protein Names | Histone H3.3 |
| Gene Symbol | H3-3a;; H3-3b |
| Organism | Mus musculus (Mouse) |
| Length | 136 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MARTKQTARK11STGGKAPRKQ21LATKAARKSA31PSTGGVKKPH41RYRPGTVALR
51-10051EIRRYQKSTE61LLIRKLPFQR71LVREIAQDFK81TDLRFQSAAI91GALQEASEAY
101-136101LVGLFEDTNL111CAIHAKRVTI121MPKDIQLARR131IRGERA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 111 | SWISSPALM DBPTM CYSMODDB | Core histone H2A/H2B/H3/H4 domain |
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.84
Deep-Palm: 0.92
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Liver
Specificity: 0.045
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.571
12
Brain tissue (Mass)
Specificity: 0.545
12/56 (21.4%)
9
Macrophage Raw 264.7 (Mass)
Specificity: 0.409
9/10 (90.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.