Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P97288 | Htr4 | 5-hydroxytryptamine receptor 4 (5-HT-4) (5-HT4) … | Mus musculus (Mouse) | 388 aa |
Protein Details: P97288 (Htr4)
Protein Information
| Accession | P97288 |
|---|---|
| Protein Names | 5-hydroxytryptamine receptor 4 (5-HT-4) (5-HT4) (Serotonin receptor 4) |
| Gene Symbol | Htr4 |
| Organism | Mus musculus (Mouse) |
| Length | 388 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34200797 |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDKLDANVSS11NEGFRSVEKV21VLLTFLAVVI31LMAILGNLLV41MVAVCRDRQL
51-10051RKIKTNYFIV61SLAFADLLVS71VLVMPFGAIE81LVQDIWAYGE91MFCLVRTSLD
101-150101VLLTTASIFH111LCCISLDRYY121AICCQPLVYR131NKMTPLRIAL141MLGGCWVLPM
151-200151FISFLPIMQG161WNNIGIVDVI171EKRKFSHNSN181STWCVFMVNK191PYAITCSVVA
201-250201FYIPFLLMVL211AYYRIYVTAK221EHAQQIQMLQ231RAGATSESRP241QPADQHSTHR
251-300251MRTETKAAKT261LCVIMGCFCF271CWAPFFVTNI281VDPFIDYTVP291EQVWTAFLWL
301-350301GYINSGLNPF311LYAFLNKSFR321RAFLIILCCD331DERYKRPPIL341GQTVPCSTTT
351-388351INGSTHVLRD361TVECGGQWES371RCHLTATSPL381VAAQPSDT
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 45 | G protein-coupled receptor, rhodopsin-like GPCR, rhodopsin-like, 7TM ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR Family A G protein-coupled receptor-like | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.86
|
|
| 93 | - | - | - |
Deep-Palm: 0.92
|
|
| 112 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.17
|
|
| 113 | - | - | - |
Deep-Palm: 0.17
|
|
| 123 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.07
|
|
| 124 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.11
|
|
| 145 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.75
|
|
| 184 | - | - | - |
Deep-Palm: 0.05
|
|
| 196 | - | - | - |
Deep-Palm: 0.03
|
|
| 262 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.04
|
|
| 267 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.03
|
|
| 269 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.02
|
|
| 271 | - | - | - |
Deep-Palm: 0.02
|
|
| 328 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.89
|
| 329 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.88
|
| 346 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.79
|
|
| 364 | - | - | - |
Deep-Palm: 0.41
|
|
| 372 | - | - | - |
Deep-Palm: 0.78
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Brain
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.