Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P97333 | Nrp1 | Neuropilin-1 (A5 protein) (CD antigen … | Mus musculus (Mouse) | 923 aa |
Protein Details: P97333 (Nrp1)
Protein Information
| Accession | P97333 |
|---|---|
| Protein Names | Neuropilin-1 (A5 protein) (CD antigen CD304) |
| Gene Symbol | Nrp1 |
| Organism | Mus musculus (Mouse) |
| Length | 923 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31772009 35477839 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MERGLPLLCA11TLALALALAG21AFRSDKCGGT31IKIENPGYLT41SPGYPHSYHP
51-10051SEKCEWLIQA61PEPYQRIMIN71FNPHFDLEDR81DCKYDYVEVI91DGENEGGRLW
101-150101GKFCGKIAPS111PVVSSGPFLF121IKFVSDYETH131GAGFSIRYEI141FKRGPECSQN
151-200151YTAPTGVIKS161PGFPEKYPNS171LECTYIIFAP181KMSEIILEFE191SFDLEQDSNP
201-250201PGGMFCRYDR211LEIWDGFPEV221GPHIGRYCGQ231KTPGRIRSSS241GVLSMVFYTD
251-300251SAIAKEGFSA261NYSVLQSSIS271EDFKCMEALG281MESGEIHSDQ291ITASSQYGTN
301-350301WSVERSRLNY311PENGWTPGED321SYKEWIQVDL331GLLRFVTAVG341TQGAISKETK
351-400351KKYYVKTYRV361DISSNGEDWI371SLKEGNKAII381FQGNTNPTDV391VLGVFSKPLI
401-450401TRFVRIKPVS411WETGISMRFE421VYGCKITDYP431CSGMLGMVSG441LISDSQITAS
451-500451NQADRNWMPE461NIRLVTSRTG471WALPPSPHPY481TNEWLQVDLG491DEKIVRGVII
501-550501QGGKHRENKV511FMRKFKIAYS521NNGSDWKTIM531DDSKRKAKSF541EGNNNYDTPE
551-600551LRTFSPLSTR561FIRIYPERAT571HSGLGLRMEL581LGCEVEAPTA591GPTTPNGNPV
601-650601DECDDDQANC611HSGTGDDFQL621TGGTTVLATE631KPTIIDSTIQ641SEFPTYGFNC
651-700651EFGWGSHKTF661CHWEHDSHAQ671LRWSVLTSKT681GPIQDHTGDG691NFIYSQADEN
701-750701QKGKVARLVS711PVVYSQSSAH721CMTFWYHMSG731SHVGTLRVKL741RYQKPEEYDQ
751-800751LVWMVVGHQG761DHWKEGRVLL771HKSLKLYQVI781FEGEIGKGNL791GGIAVDDISI
801-850801NNHISQEDCA811KPTDLDKKNT821EIKIDETGST831PGYEGEGEGD841KNISRKPGNV
851-900851LKTLDPILIT861IIAMSALGVL871LGAVCGVVLY881CACWHNGMSE891RNLSALENYN
901-923901FELVDGVKLK911KDKLNPQSNY921SEA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 9 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.94
|
|
| 27 | CUB domain Spermadhesin, CUB domain superfamily | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.97
|
|
| 54 | - |
brain
(39008777)
| - |
Deep-Palm: 0.06
|
|
| 82 | - | - | - |
Deep-Palm: 0.03
|
|
| 104 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.59
|
|
| 147 | - | - | - |
Deep-Palm: 0.76
|
|
| 173 | - | - | - |
Deep-Palm: 0.39
|
|
| 206 | - | - | - |
Deep-Palm: 0.46
|
|
| 228 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.40
|
|
| 275 | - | - | - |
Deep-Palm: 0.20
|
|
| 424 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.15
|
|
| 431 | - | - | - |
Deep-Palm: 0.23
|
|
| 583 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.97
|
|
| 603 | - | - | - |
Deep-Palm: 0.03
|
|
| 610 | - | - | - |
Deep-Palm: 0.03
|
|
| 650 | - | - | - |
Deep-Palm: 0.02
|
|
| 661 | - | - | - |
Deep-Palm: 0.03
|
|
| 721 | - | - | - |
Deep-Palm: 0.04
|
|
| 809 | - | - | - |
Deep-Palm: 0.22
|
|
| 875 | SWISSPALM | C-terminal domain of neuropilin glycoprotein | - | - |
Deep-Palm: 0.39
|
| 881 | - | - | - |
Deep-Palm: 0.96
|
|
| 883 | SWISSPALM | C-terminal domain of neuropilin glycoprotein | - | - |
Deep-Palm: 0.90
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Testis
Specificity: 0.667
2/2 (100.0%)
1
NSC
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.