Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P97351 | Rps3a | Small ribosomal subunit protein eS1 … | Mus musculus (Mouse) | 264 aa |
Protein Details: P97351 (Rps3a)
Protein Information
| Accession | P97351 |
|---|---|
| Protein Names | Small ribosomal subunit protein eS1 (40S ribosomal protein S3a) (Protein TU-11) |
| Gene Symbol | Rps3a |
| Organism | Mus musculus (Mouse) |
| Length | 264 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAVGKNKRLT11KGGKKGAKKK21VVDPFSKKDW31YDVKAPAMFN41IRNIGKTLVT
51-10051RTQGTKIASD61GLKGRVFEVS71LADLQNDEVA81FRKFKLITED91VQGKNCLTNF
101-150101HGMDLTRDKM111CSMVKKWQTM121IEAHVDVKTT131DGYLLRLFCV141GFTKKRNNQI
151-200151RKTSYAQHQQ161VRQIRKKMME171IMTREVQTND181LKEVVNKLIP191DSIGKDIEKA
201-250201CQSIYPLHDV211FVRKVKMLKK221PKFELGKLME231LHGEGGSSGK241AAGDETGAKV
251-264251ERADGYEPPV261QESV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 96 | SWISSPALM DBPTM CYSMODDB | Ribosomal S3Ae family |
Liver
(28526873)
| - |
Deep-Palm: 0.37
|
| 111 | - | - | - |
Deep-Palm: 0.27
|
|
| 139 | SWISSPALM DBPTM CYSMODDB | Ribosomal S3Ae family |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.96
Deep-Palm: 0.92
|
| 201 | SWISSPALM DBPTM CYSMODDB | Ribosomal S3Ae family |
Brain
(31311849)
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.76
Deep-Palm: 0.89
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
6
Liver
Specificity: 0.240
6/6 (100.0%)
2
Brain
Specificity: 0.080
2/2 (100.0%)
2
Testis
Specificity: 0.080
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
15
Brain tissue (Mass)
Specificity: 0.600
15/56 (26.8%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.