Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P97427 | Crmp1 | Dihydropyrimidinase-related protein 1 (DRP-1) (Collapsin … | Mus musculus (Mouse) | 572 aa |
Protein Details: P97427 (Crmp1)
Protein Information
| Accession | P97427 |
|---|---|
| Protein Names | Dihydropyrimidinase-related protein 1 (DRP-1) (Collapsin response mediator protein 1) (CRMP-1) (Inactive dihydropyrimidinase) (Unc-33-like phosphoprotein 3) (ULIP-3) |
| Gene Symbol | Crmp1 |
| Organism | Mus musculus (Mouse) |
| Length | 572 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 34200797 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSHQGKKSIP11HITSDRLLIR21GGRIINDDQS31FYADVYLEDG41LIKQIGENLI
51-10051VPGGVKTIEA61NGRMVIPGGI71DVNTYLQKPS81QGMTSADDFF91QGTKAALAGG
101-150101TTMIIDHVVP111EPGSSLLTSF121EKWHEAADTK131SCCDYSLHVD141ITSWYDGVRE
151-200151ELEVLVQDKG161VNSFQVYMAY171KDLYQMSDSQ181LYEAFTFLKG191LGAVILVHAE
201-250201NGDLIAQEQK211RILEMGITGP221EGHALSRPEE231LEAEAVFRAI241AIAGRINCPV
251-300251YITKVMSKSA261ADIIALARKK271GPLVFGEPIA281ASLGTDGTHY291WSKNWAKAAA
301-350301FVTSPPLSPD311PTTPDYLTSL321LACGDLQVTG331SGHCPYSTAQ341KAVGKDNFTL
351-400351IPEGVNGIEE361RMTVVWDKAV371ATGKMDENQF381VAVTSTNAAK391IFNLYPRKGR
401-450401IAVGSDADVV411IWDPDKMKTI421TAKSHKSTVE431YNIFEGMECH441GSPLVVISQG
451-500451KIVFEDGNIS461VSKGMGRFIP471RKPFPEHLYQ481RVRIRSKVFG491LHSVSRGMYD
501-550501GPVYEVPATP511KHAAPAPSAK521SSPSKHQPPP531IRNLHQSNFS541LSGAQIDDNN
551-572551PRRTGHRIVA561PPGGRSNITS571LG
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 132 | - | - | - |
Deep-Palm: 0.09
|
|
| 133 | - | - | - |
Deep-Palm: 0.06
|
|
| 248 | - |
Brain
(34200797)
|
Brain
(35358180)
|
GPS-Palm: 0.92
Deep-Palm: 0.94
|
|
| 323 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.93
|
|
| 334 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.91
|
|
| 439 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.83
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
Brain
Specificity: 0.267
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
11
Brain tissue (Mass)
Specificity: 0.733
11/56 (19.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.