Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q00519 | Xdh | Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase … | Mus musculus (Mouse) | 1335 aa |
Protein Details: Q00519 (Xdh)
Protein Information
| Accession | Q00519 |
|---|---|
| Protein Names | Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase (XD) (EC 1.17.1.4); Xanthine oxidase (XO) (EC 1.17.3.2) (Xanthine oxidoreductase) (XOR)] |
| Gene Symbol | Xdh |
| Organism | Mus musculus (Mouse) |
| Length | 1335 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MTRTTVDELV11FFVNGKKVVE21KNADPETTLL31VYLRRKLGLC41GTKLGCGEGG
51-10051CGACTVMISK61YDRLQNKIVH71FSVNACLTPI81CSLHHVAVTT91VEGIGNTKKL
101-150101HPVQERIAKS111HGSQCGFCTP121GIVMSMYTLL131RNKPEPTVEE141IENAFQGNLC
151-200151RCTGYRPILQ161GFRTFAKDGG171CCGGSGNNPN181CCMSQTKDQT191IAPSSSLFNP
201-250201EDFKPLDPTQ211EPIFPPELLR221LKDTPRKTLR231FEGERVTWIQ241VSTMEELLDL
251-300251KAQHPDAKLV261VGNTEIGIEM271KFKNMLFPLI281ICPAWILELT291SVAHGPEGIS
301-350301FGAACPLSLV311ESVLADAIAT321LPEQRTEVFR331GVMEQLRWFA341GKQVKSVASI
351-400351GGNIITASPI361SDLNPVLMAS371RAKLTLASRG381TKRTVWMDHT391FFPGYRRTLL
401-450401SPEEILVSIV411IPYSRKGEFF421SAFKQASRRE431DDIAKVTSGM441RVLFKPGTTE
451-500451VQELSLCFGG461MADRTVSALK471TTPKQLSKSW481NEELLQDVCA491GLAEELHLAP
501-550501DAPGGMVEFR511RTLTLSFFFK521FYLTVLQKLG531RADLEGMCGK541LDPTFASATL
551-600551LFQKDPPANV561QLFQEVPKGQ571SEEDMVGRPM581PHLAADMQAS591GEAVYCDDIP
601-650601RYENELSLRL611VTSTRAHAKI621MSIDTSEAKK631VPGFVCFLTS641EDVPGSNITG
651-700651IFNDETVFAK661DEVTCVGHII671GAVVADTPEH681AHRAARGVKI691TYEDLPAIIT
701-750701IQDAIKNNSF711YGPEVKIEKG721DLKKGFSEAD731NVVSGELYIG741GQEHFYLETH
751-800751CTIAVPKGEA761GEMELFVSTQ771NTMKTQSFIA781KMLGVPDNRI791VVRVKRMGGG
801-850801FGGKETRSTL811ISTAVALAAY821KTGRPVRCML831DRDEDMLITG841GRHPFLAKYK
851-900851VGFMKTGTIV861ALEVAHFSNG871GNSEDLSRSI881MERAVFHMDN891AYKIPNIRGT
901-950901GRICKTNLPS911NTAFRGFGGP921QGMLIAEYWM931SEVAVTCGLP941AEEVRRKNMY
951-1000951KEGDLTHFNQ961KLEGFTLPRC971WDECIASSQY981QARKMEVEKF991NRENCWKKRG
1001-10501001LCIIPTKFGI1011SFTLSFLNQG1021GALVHVYTDG1031SVLLTHGGTE1041MGQGLHTKMV
1051-11001051QVASRALKIP1061TSKIHITETS1071TNTVPNTSPT1081AASASADLNG1091QAIYEACQTI
1101-11501101LKRLEPFKKK1111NPSGSWESWV1121MDAYTSAVSL1131SATGFYKTPN1141LGYSFETNSG
1151-12001151NPFHYFSYGV1161ACSEVEIDCL1171TGDHKNLRTD1181IVMDVGSSLN1191PAIDIGQVEG
1201-12501201AFVQGLGLFT1211MEELHYSPEG1221SLHTRGPSTY1231KIPAFGSIPI1241EFRVSLLRDC
1251-13001251PNKRAIYASK1261AVGEPPLFLA1271SSIFFAIKDA1281IRAARAQHGD1291SNAKQLFQLD
1301-13351301SPATPEKIRN1311ACVDQFTTLC1321ATGTPENCKS1331WSVRI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 40 | 2Fe-2S ferredoxin-like superfamily Aldehyde oxidase/xanthine dehydrogenase-like Beta-grasp domain superfamily 2Fe-2S ferredoxin-type iron-sulfur binding domain 2Fe-2S ferredoxin, iron-sulphur binding site | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.97
|
|
| 46 | Beta-grasp domain superfamily Aldehyde oxidase/xanthine dehydrogenase-like | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.95
|
|
| 51 | 2Fe-2S ferredoxin-like superfamily Aldehyde oxidase/xanthine dehydrogenase-like Beta-grasp domain superfamily 2Fe-2S ferredoxin-type iron-sulfur binding domain | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.91
|
|
| 54 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.64
|
|
| 76 | - | - | - |
Deep-Palm: 0.24
|
|
| 81 | - | - | - |
Deep-Palm: 0.31
|
|
| 115 | - | - | - |
Deep-Palm: 0.38
|
|
| 118 | - | - | - |
Deep-Palm: 0.42
|
|
| 150 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.77
|
|
| 152 | - | - |
Liver
(37925639)
|
GPS-Palm: 0.72
Deep-Palm: 0.78
|
|
| 171 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.16
|
|
| 172 | - | - | - |
Deep-Palm: 0.11
|
|
| 181 | - | - | - |
Deep-Palm: 0.05
|
|
| 182 | - | - | - |
Deep-Palm: 0.06
|
|
| 282 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.53
|
|
| 305 | - | - | - |
Deep-Palm: 0.97
|
|
| 457 | SWISSPALM DBPTM CYSMODDB | CO dehydrogenase flavoprotein C-terminal domain |
Liver
(28526873)
| - |
Deep-Palm: 0.97
|
| 489 | - | - | - |
Deep-Palm: 0.97
|
|
| 538 | - | - | - |
Deep-Palm: 0.98
|
|
| 596 | - | - | - |
Deep-Palm: 0.88
|
|
| 636 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.95
|
|
| 665 | - | - | - |
Deep-Palm: 0.80
|
|
| 751 | - | - | - |
Deep-Palm: 0.60
|
|
| 828 | - | - | - |
Deep-Palm: 0.97
|
|
| 904 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.84
|
|
| 937 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.81
|
|
| 970 | - | - |
Liver
(37925639)
|
Deep-Palm: 0.50
|
|
| 974 | - | - |
Liver
(37925639)
|
GPS-Palm: 0.77
Deep-Palm: 0.77
|
|
| 995 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.67
|
|
| 1002 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.69
|
|
| 1097 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.97
|
|
| 1162 | - | - | - |
Deep-Palm: 0.46
|
|
| 1169 | - | - | - |
Deep-Palm: 0.61
|
|
| 1250 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.95
|
|
| 1312 | - | - | - |
Deep-Palm: 0.61
|
|
| 1320 | - | - | - |
Deep-Palm: 0.68
|
|
| 1328 | - | - | - |
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Liver
Specificity: 0.750
6/6 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Liver tissue (Mass)
Specificity: 0.250
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.