Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q01151 | CD83 | CD83 antigen (hCD83) (B-cell activation … | Homo sapiens (Human) | 205 aa |
Protein Details: Q01151 (CD83)
Protein Information
| Accession | Q01151 |
|---|---|
| Protein Names | CD83 antigen (hCD83) (B-cell activation protein) (Cell surface protein HB15) (CD antigen CD83) |
| Gene Symbol | CD83 |
| Organism | Homo sapiens (Human) |
| Length | 205 aa |
| Isoforms | No isoforms |
| Related PMIDs | 26111759 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSRGLQLLLL11SCAYSLAPAT21PEVKVACSED31VDLPCTAPWD41PQVPYTVSWV
51-10051KLLEGGEERM61ETPQEDHLRG71QHYHQKGQNG81SFDAPNERPY91SLKIRNTTSC
101-150101NSGTYRCTLQ111DPDGQRNLSG121KVILRVTGCP131AQRKEETFKK141YRAEIVLLLA
151-200151LVIFYLTLII161FTCKFARLQS171IFPDFSKAGM181ERAFLPVTSP191NKHLGLVTPH
201-205201KTELV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 12 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.80
|
|
| 27 | CD83 ANTIGEN | - | - |
Deep-Palm: 0.79
|
|
| 35 | CD83 ANTIGEN | - | - |
Deep-Palm: 0.54
|
|
| 100 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.14
|
|
| 107 | - | - | - |
Deep-Palm: 0.51
|
|
| 129 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.96
|
|
| 163 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.93
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Primary T cell
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 107 | C → C | 0.001887 | SNP | Silent | UCEC |