Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q01320 | Top2a | DNA topoisomerase 2-alpha (EC 5.6.2.2) … | Mus musculus (Mouse) | 1528 aa |
Protein Details: Q01320 (Top2a)
Protein Information
| Accession | Q01320 |
|---|---|
| Protein Names | DNA topoisomerase 2-alpha (EC 5.6.2.2) (DNA topoisomerase II, alpha isozyme) |
| Gene Symbol | Top2a |
| Organism | Mus musculus (Mouse) |
| Length | 1528 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MELSPLQPVN11ENMLMNKKKN21EDGKKRLSIE31RIYQKKTQLE41HILLRPDTYI
51-10051GSVELVTQQM61WVYDEDVGIN71YREVTFVPGL81YKIFDEILVN91AADNKQRDPK
101-150101MSCIRVTIDP111ENNVISIWNN121GKGIPVVEHK131VEKIYVPALI141FGQLLTSSNY
151-200151DDDEKKVTGG161RNGYGAKLCN171IFSTKFTVET181ASREYKKMFK191QTWMDNMGRA
201-250201GDMELKPFSG211EDYTCITFQP221DLSKFKMQSL231DKDIVALMVR241RAYDIAGSTK
251-300251DVKVFLNGNS261LPVKGFRSYV271DLYLKDKVDE281TGNSLKVIHE291QVNPRWEVCL
301-350301TMSERGFQQI311SFVNSIATSK321GGRHVDYVAD331QIVSKLVDVV341KKKNKGGVAV
351-400351KAHQVKNHMW361IFVNALIENP371TFDSQTKENM381TLQAKSFGST391CQLSEKFIKA
401-450401AIGCGIVESI411LNWVKFKAQI421QLNKKCSAVK431HTKIKGIPKL441DDANDAGSRN
451-500451STECTLILTE461GDSAKTLAVS471GLGVVGRDKY481GVFPLRGKIL491NVREASHKQI
501-550501MENAEINNII511KIVGLQYKKN521YEDEDSLKTL531RYGKIMIMTD541QDQDGSHIKG
551-600551LLINFIHHNW561PSLLRHRFLE571EFITPIVKVS581KNKQEIAFYS591LPEFEEWKSS
601-650601TPNHKKWKVK611YYKGLGTSTS621KEAKEYFADM631KRHRIQFKYS641GPEDDAAISL
651-700651AFSKKQVDDR661KEWLTNFMED671RRQRKLLGLP681EDYLYGQSTS691YLTYNDFINK
701-750701ELILFSNSDN711ERSIPSMVDG721LKPGQRKVLF731TCFKRNDKRE741VKVAQLAGSV
751-800751AEMSSYHHGE761MSLMMTIINL771AQNFVGSNNL781NLLQPIGQFG791TRLHGGKDSA
801-850801SPRYIFTMLS811PLARLLFPPK821DDHTLRFLYD831DNQRVEPEWY841IPIIPMVLIN
851-900851GAEGIGTGWS861CKIPNFDVRE871VVNNIRRLLD881GEEPLPMLPS891YKNFKGTIEE
901-950901LASNQYVING911EVAILDSTTI921EISELPIRTW931TQTYKEQVLE941PMLNGTEKTP
951-1000951SLITDYREYH961TDTTVKFVIK971MTEEKLAEAE981RVGLHKVFKL991QSSLTCNSMV
1001-10501001LFDHVGCLKK1011YDTVLDILRD1021FFELRLKYYG1031LRKEWLLGML1041GAESSKLNNQ
1051-11001051ARFILEKIDG1061KIVIENKPKK1071ELIKVLIQRG1081YDSDPVKAWK1091EAQQKVPDEE
1101-11501101ENEESDTETS1111TSDSAAEAGP1121TFNYLLDMPL1131WYLTKEKKDE1141LCKQRNEKEQ
1151-12001151ELNTLKQKSP1161SDLWKEDLAV1171FIEELEVVEA1181KEKQDEQVGL1191PGKAGKAKGK
1201-12501201KAQMCADVLP1211SPRGKRVIPQ1221VTVEMKAEAE1231KKIRKKIKSE1241NVEGTPAEDG
1251-13001251AEPGSLRQRI1261EKKQKKEPGA1271KKQTTLPFKP1281VKKGRKKNPW1291SDSESDVSSN
1301-13501301ESNVDVPPRQ1311KEQRSAAAKA1321KFTVDLDSDE1331DFSGLDEKDE1341DEDFLPLDAT
1351-14001351PPKAKIPPKN1361TKKALKTQGS1371SMSVVDLESD1381VKDSVPASPG1391VPAADFPAET
1401-14501401EQSKPSKKTV1411GVKKTATKSQ1421SSVSTAGTKK1431RAAPKGTKSD1441SALSARVSEK
1451-15001451PAPAKAKNSR1461KRKPSSSDSS1471DSDFERAISK1481GATSKKAKGE1491EQDFPVDLED
1501-15281501TIAPRAKSDR1511ARKPIKYLEE1521SDDDDDLF
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 103 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.25
|
|
| 169 | - |
MLE
(39008777)
| - |
GPS-Palm: 0.87
Deep-Palm: 0.93
|
|
| 215 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.73
|
|
| 299 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.43
|
|
| 391 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.86
|
|
| 404 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.80
|
|
| 426 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.85
|
|
| 454 | - | - | - |
Deep-Palm: 0.85
|
|
| 732 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.95
|
|
| 861 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.59
|
|
| 996 | - | - | - |
GPS-Palm: 0.69
Deep-Palm: 0.64
|
|
| 1007 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.54
|
|
| 1142 | - | - | - |
Deep-Palm: 0.96
|
|
| 1205 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Raw 264.7
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.