Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q01853 | Vcp | Transitional endoplasmic reticulum ATPase (TER … | Mus musculus (Mouse) | 806 aa |
Protein Details: Q01853 (Vcp)
Protein Information
| Accession | Q01853 |
|---|---|
| Protein Names | Transitional endoplasmic reticulum ATPase (TER ATPase) (EC 3.6.4.6) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) |
| Gene Symbol | Vcp |
| Organism | Mus musculus (Mouse) |
| Length | 806 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 29733200 31311849 31772009 34200797 34884899 35358180 35477839 37925639 39008777 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.452
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
19
Liver tissue
Specificity: 0.452
19/19 (100.0%)
12
Brain tissue
Specificity: 0.286
12/12 (100.0%)
6
Liver membrane
Specificity: 0.143
6/6 (100.0%)
3
Neural Stem Cells
Specificity: 0.071
3/3 (100.0%)
2
Testis
Specificity: 0.048
2/2 (100.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MASGADSKGD11DLSTAILKQK21NRPNRLIVDE31AINEDNSVVS41LSQPKMDELQ
51-10051LFRGDTVLLK61GKKRREAVCI71VLSDDTCSDE81KIRMNRVVRN91NLRVRLGDVI
101-150101SIQPCPDVKY111GKRIHVLPID121DTVEGITGNL131FEVYLKPYFL141EAYRPIRKGD
151-200151IFLVRGGMRA161VEFKVVETDP171SPYCIVAPDT181VIHCEGEPIK191REDEEESLNE
201-250201VGYDDIGGCR211KQLAQIKEMV221ELPLRHPALF231KAIGVKPPRG241ILLYGPPGTG
251-300251KTLIARAVAN261ETGAFFFLIN271GPEIMSKLAG281ESESNLRKAF291EEAEKNAPAI
301-350301IFIDELDAIA311PKREKTHGEV321ERRIVSQLLT331LMDGLKQRAH341VIVMAATNRP
351-400351NSIDPALRRF361GRFDREVDIG371IPDATGRLEI381LQIHTKNMKL391ADDVDLEQVA
401-450401NETHGHVGAD411LAALCSEAAL421QAIRKKMDLI431DLEDETIDAE441VMNSLAVTMD
451-500451DFRWALSQSN461PSALRETVVE471VPQVTWEDIG481GLEDVKRELQ491ELVQYPVEHP
501-550501DKFLKFGMTP511SKGVLFYGPP521GCGKTLLAKA531IANECQANFI541SIKGPELLTM
551-600551WFGESEANVR561EIFDKARQAA571PCVLFFDELD581SIAKARGGNI591GDGGGAADRV
601-650601INQILTEMDG611MSTKKNVFII621GATNRPDIID631PAILRPGRLD641QLIYIPLPDE
651-700651KSRVAILKAN661LRKSPVAKDV671DLEFLAKMTN681GFSGADLTEI691CQRACKLAIR
701-750701ESIESEIRRE711RERQTNPSAM721EVEEDDPVPE731IRRDHFEEAM741RFARRSVSDN
751-800751DIRKYEMFAQ761TLQQSRGFGS771FRFPSGNQGG781AGPSQGSGGG791TGGSVYTEDN
801-806801DDDLYG
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 69 | Prediction (Medium) | - | - |
| 77 | Prediction (Low) | - | - |
| 105 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | Cell division protein 48 (CDC48) N-terminal domain | 31311849, 28526873 |
| 174 | Experimental | Cell division protein 48 (CDC48) domain 2 | 34200797 |
| 184 | Experimental Prediction (Low) | Cell division protein 48 (CDC48) domain 2 | 34200797 |
| 209 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (Medium) | - | 28526873 |
| 415 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (Medium) | AAA+ lid domain | 28526873 |
| 522 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | ATPase family associated with various cellular activities (AAA) | 39008777, 28526873 |
| 535 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (Medium) | ATPase family associated with various cellular activities (AAA) | 39008777, 28526873 |
| 572 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | ATPase family associated with various cellular activities (AAA) | 28526873 |
| 691 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | AAA+ lid domain | 28526873 |
| 695 | Prediction (Medium) | - | - |