Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q02218-2 | OGDH | 2-oxoglutarate dehydrogenase complex component E1 … | Homo sapiens (Human) | 1019 aa |
Protein Details: Q02218-2 (OGDH)
Protein Information
| Accession | Q02218-2 |
|---|---|
| Protein Names | 2-oxoglutarate dehydrogenase complex component E1 (E1o) (HsOGDH) (OGDC-E1) (OGDH-E1) (EC 1.2.4.2) (2-oxoglutarate dehydrogenase, mitochondrial) (Alpha-ketoglutarate dehydrogenase) (Alpha-KGDH-E1) (Thiamine diphosphate (ThDP)-dependent 2-oxoglutarate dehydrogenase) |
| Gene Symbol | OGDH |
| Organism | Homo sapiens (Human) |
| Length | 1019 aa |
| Isoforms | |
| Related PMIDs | 36430497 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MFHLRTCAAK11LRPLTASQTV21KTFSQNRPAA31ARTFQQIRCY41SAPVAAEPFL
51-10051SGTSSNYVEE61MYCAWLENPK71SVHKSWDIFF81RNTNAGAPPG91TAYQSPLPLS
101-150101RGSLAAVAHA111QSLVEAQPNV121DKLVEDHLAV131QSLIRAYQVR141GHHIAKLDPL
151-200151GISCVNFDDA161PVTVSSNVGF171YGLDESDLDK181VFHLPTTTFI191GGQESALPLR
201-250201EIIRRLEMAY211CQHIGVEFMF221INDLEQCQWI231RQKFETPGIM241QFTNEEKRTL
251-300251LARLVRSTRF261EEFLQRKWSS271EKRFGLEGCE281VLIPALKTII291DKSSENGVDY
301-350301VIMGMPHRGR311LNVLANVIRK321ELEQIFCQFD331SKLEAADEGS341GDVKYHLGMY
351-400351HRRINRVTDR361NITLSLVANP371SHLEAADPVV381MGKTKAEQFY391CGDTEGKKVM
401-450401SILLHGDAAF411AGQGIVYETF421HLSDLPSYTT431HGTVHVVVNN441QIGFTTDPRM
451-500451ARSSPYPTDV461ARVVNAPIFH471VNSDDPEAVM481YVCKVAAEWR491STFHKDVVVD
501-550501LVCYRRNGHN511EMDEPMFTQP521LMYKQIRKQK531PVLQKYAELL541VSQGVVNQPE
551-600551YEEEISKYDK561ICEEAFARSK571DEKILHIKHW581LDSPWPGFFT591LDGQPRSMSC
601-650601PSTGLTEDIL611THIGNVASSV621PVENFTIHGG631LSRILKTRGE641MVKNRTVDWA
651-700651LAEYMAFGSL661LKEGIHIRLS671GQDVERGTFS681HRHHVLHDQN691VDKRTCIPMN
701-750701HLWPNQAPYT711VCNSSLSEYG721VLGFELGFAM731ASPNALVLWE741AQFGDFHNTA
751-800751QCIIDQFICP761GQAKWVRQNG771IVLLLPHGME781GMGPEHSSAR791PERFLQMCND
801-850801DPDVLPDLKE811ANFDINQLYD821CNWVVVNCST831PGNFFHVLRR841QILLPFRKPL
851-900851IIFTPKSLLR861HPEARSSFDE871MLPGTHFQRV881IPEDGPAAQN891PENVKRLLFC
901-950901TGKVYYDLTR911ERKARDMVGQ921VAITRIEQLS931PFPFDLLLKE941VQKYPNAELA
951-1000951WCQEEHKNQG961YYDYVKPRLR971TTISRAKPVW981YAGRDPAAAP991ATGNKKTHLT
1001-10191001ELQRLLDTAF1011DLDVFKNFS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 7 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.06
|
|
| 39 | - | - | - |
Deep-Palm: 0.81
|
|
| 63 | - | - | - |
Deep-Palm: 0.08
|
|
| 215 | - | - | - |
Deep-Palm: 0.70
|
|
| 231 | - | - | - |
Deep-Palm: 0.05
|
|
| 279 | - | - | - |
GPS-Palm: 0.91
|
|
| 283 | - | - | - |
Deep-Palm: 0.97
|
|
| 331 | - | - | - |
Deep-Palm: 0.94
|
|
| 395 | - | - | - |
Deep-Palm: 0.91
|
|
| 487 | - | - | - |
Deep-Palm: 0.11
|
|
| 507 | - | - | - |
Deep-Palm: 0.38
|
|
| 566 | - | - | - |
Deep-Palm: 0.61
|
|
| 604 | - | - | - |
Deep-Palm: 0.77
|
|
| 700 | - | - | - |
Deep-Palm: 0.04
|
|
| 716 | - | - | - |
Deep-Palm: 0.58
|
|
| 756 | - | - | - |
Deep-Palm: 0.11
|
|
| 763 | - | - | - |
Deep-Palm: 0.11
|
|
| 802 | - | - | - |
Deep-Palm: 0.85
|
|
| 825 | - | - | - |
Deep-Palm: 0.06
|
|
| 832 | - | - | - |
Deep-Palm: 0.09
|
|
| 904 | - | - | - |
Deep-Palm: 0.96
|
|
| 956 | - | - | - |
Deep-Palm: 0.79
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
cerebral cortex
Specificity: 1.000
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 41 | S → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 81 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 81 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 277 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 283 | C → C | 0.001887 | SNP | Silent | UCEC |
| 604 | C → C | 0.001764 | SNP | Silent | LUAD |
| 653 | W → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 686 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 700 | C → S | 0.001764 | SNP | Missense Mutation | LUAD |
| 713 | Y → C | 0.002976 | SNP | Missense Mutation | KIRC |
| 769 | W → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 794 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 864 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 904 | C → C | 0.001969 | SNP | Silent | LGG |
| 909 | Y → C | 0.001887 | SNP | Missense Mutation | UCEC |