Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q02248 | Ctnnb1 | Catenin beta-1 (Beta-catenin) | Mus musculus (Mouse) | 781 aa |
Protein Details: Q02248 (Ctnnb1)
Protein Information
| Accession | Q02248 |
|---|---|
| Protein Names | Catenin beta-1 (Beta-catenin) |
| Gene Symbol | Ctnnb1 |
| Organism | Mus musculus (Mouse) |
| Length | 781 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34200797 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MATQADLMEL11DMAMEPDRKA21AVSHWQQQSY31LDSGIHSGAT41TTAPSLSGKG
51-10051NPEEEDVDTS61QVLYEWEQGF71SQSFTQEQVA81DIDGQYAMTR91AQRVRAAMFP
101-150101ETLDEGMQIP111STQFDAAHPT121NVQRLAEPSQ131MLKHAVVNLI141NYQDDAELAT
151-200151RAIPELTKLL161NDEDQVVVNK171AAVMVHQLSK181KEASRHAIMR191SPQMVSAIVR
201-250201TMQNTNDVET211ARCTAGTLHN221LSHHREGLLA231IFKSGGIPAL241VKMLGSPVDS
251-300251VLFYAITTLH261NLLLHQEGAK271MAVRLAGGLQ281KMVALLNKTN291VKFLAITTDC
301-350301LQILAYGNQE311SKLIILASGG321PQALVNIMRT331YTYEKLLWTT341SRVLKVLSVC
351-400351SSNKPAIVEA361GGMQALGLHL371TDPSQRLVQN381CLWTLRNLSD391AATKQEGMEG
401-450401LLGTLVQLLG411SDDINVVTCA421AGILSNLTCN431NYKNKMMVCQ441VGGIEALVRT
451-500451VLRAGDREDI461TEPAICALRH471LTSRHQEAEM481AQNAVRLHYG491LPVVVKLLHP
501-550501PSHWPLIKAT511VGLIRNLALC521PANHAPLREQ531GAIPRLVQLL541VRAHQDTQRR
551-600551TSMGGTQQQF561VEGVRMEEIV571EGCTGALHIL581ARDVHNRIVI591RGLNTIPLFV
601-650601QLLYSPIENI611QRVAAGVLCE621LAQDKEAAEA631IEAEGATAPL641TELLHSRNEG
651-700651VATYAAAVLF661RMSEDKPQDY671KKRLSVELTS681SLFRTEPMAW691NETADLGLDI
701-750701GAQGEALGYR711QDDPSYRSFH721SGGYGQDALG731MDPMMEHEMG741GHHPGADYPV
751-781751DGLPDLGHAQ761DLMDGLPPGD771SNQLAWFDTD781L
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 213 | - |
Brain
(31311849)
|
Brain
(31311849)
|
Deep-Palm: 0.50
|
|
| 300 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.77
|
|
| 350 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.92
Deep-Palm: 0.98
|
|
| 381 | SWISSPALM DBPTM CYSMODDB | Armadillo/beta-catenin-like repeat |
Liver
(28526873)
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.92
Deep-Palm: 0.95
|
| 419 | - | - | - |
Deep-Palm: 0.83
|
|
| 429 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.49
|
|
| 439 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.86
|
|
| 466 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Brain
(31311849)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.94
Deep-Palm: 0.97
|
| 520 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
liver
(26165157)
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.94
Deep-Palm: 0.98
|
| 573 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Liver
(34884899)
Brain
(35358180)
|
GPS-Palm: 0.92
Deep-Palm: 0.45
|
| 619 | SWISSPALM DBPTM CYSMODDB | Armadillo/beta-catenin-like repeat |
Liver
(28526873)
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.92
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.455
5
Brain
Specificity: 0.179
5/5 (100.0%)
4
Liver
Specificity: 0.143
4/4 (100.0%)
2
Testis
Specificity: 0.071
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
17
Brain tissue (Mass)
Specificity: 0.607
17/56 (30.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.