Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q03265 | Atp5f1a | ATP synthase F(1) complex subunit … | Mus musculus (Mouse) | 553 aa |
Protein Details: Q03265 (Atp5f1a)
Protein Information
| Accession | Q03265 |
|---|---|
| Protein Names | ATP synthase F(1) complex subunit alpha, mitochondrial (ATP synthase F1 subunit alpha) |
| Gene Symbol | Atp5f1a |
| Organism | Mus musculus (Mouse) |
| Length | 553 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 29733200 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLSVRVAAAV11ARALPRRAGL21VSKNALGSSF31VGARNLHASN41TRLQKTGTAE
51-10051MSSILEERIL61GADTSVDLEE71TGRVLSIGDG81IARVHGLRNV91QAEEMVEFSS
101-150101GLKGMSLNLE111PDNVGVVVFG121NDKLIKEGDV131VKRTGAIVDV141PVGEELLGRV
151-200151VDALGNAIDG161KGPIGSKTRR171RVGLKAPGII181PRISVREPMQ191TGIKAVDSLV
201-250201PIGRGQRELI211IGDRQTGKTS221IAIDTIINQK231RFNDGTDEKK241KLYCIYVAIG
251-300251QKRSTVAQLV261KRLTDADAMK271YTIVVSATAS281DAAPLQYLAP291YSGCSMGEYF
301-350301RDNGKHALII311YDDLSKQAVA321YRQMSLLLRR331PPGREAYPGD341VFYLHSRLLE
351-400351RAAKMNDSFG361GGSLTALPVI371ETQAGDVSAY381IPTNVISITD391GQIFLETELF
401-450401YKGIRPAINV411GLSVSRVGSA421AQTRAMKQVA431GTMKLELAQY441REVAAFAQFG
451-500451SDLDAATQQL461LSRGVRLTEL471LKQGQYSPMA481IEEQVAVIYA491GVRGYLDKLE
501-550501PSKITKFENA511FLSHVISQHQ521SLLGNIRSDG531KISEQSDAKL541KEIVTNFLAG
551-553551FEP
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 244 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
liver
(26165157)
|
Brain
(35358180)
|
GPS-Palm: 0.87
Deep-Palm: 0.79
|
| 294 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.81
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.545
6
Liver
Specificity: 0.188
6/6 (100.0%)
2
Brain
Specificity: 0.062
2/2 (100.0%)
2
Testis
Specificity: 0.062
2/2 (100.0%)
1
Raw 264.7
Specificity: 0.031
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
21
Brain tissue (Mass)
Specificity: 0.656
21/56 (37.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.