Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q03717 | Kcnb1 | Potassium voltage-gated channel subfamily B … | Mus musculus (Mouse) | 857 aa |
Protein Details: Q03717 (Kcnb1)
Protein Information
| Accession | Q03717 |
|---|---|
| Protein Names | Potassium voltage-gated channel subfamily B member 1 (Voltage-gated potassium channel subunit Kv2.1) (mShab) |
| Gene Symbol | Kcnb1 |
| Organism | Mus musculus (Mouse) |
| Length | 857 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34200797 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPAGMTKHGS11RSTSSLPPEP21MEIVRSKACS31RRVRLNVGGL41AHEVLWRTLD
51-10051RLPRTRLGKL61RDCNTHDSLL71QVCDDYSLED81NEYFFDRHPG91AFTSILNFYR
101-150101TGRLHMMEEM111CALSFSQELD121YWGIDEIYLE131SCCQARYHQK141KEQMNEELKR
151-200151EAETLREREG161EEFDNTCCAE171KRKKLWDLLE181KPNSSVAAKI191LAIISIMFIV
201-250201LSTIALSLNT211LPELQSLDEF221GQSTDNPQLA231HVEAVCIAWF241TMEYLLRFLS
251-300251SPKKWKFFKG261PLNAIDLLAI271LPYYVTIFLT281ESNKSVLQFQ291NVRRVVQIFR
301-350301IMRILRILKL311ARHSTGLQSL321GFTLRRSYNE331LGLLILFLAM341GIMIFSSLVF
351-400351FAEKDEDDTK361FKSIPASFWW371ATITMTTVGY381GDIYPKTLLG391KIVGGLCCIA
401-450401GVLVIALPIP411IIVNNFSEFY421KEQKRQEKAI431KRREALERAK441RNGSIVSMNM
451-500451KDAFARSIEM461MDIVVEKNGE471GVAKKDKVQD481NHLSPNKWKW491TKRALSETSS
501-550501SKSFETKEQG511SPEKARSSSS521PQHLNVQQLQ531DMYSKMAKTQ541SQPILNTKEM
551-600551APQSQPQEEL561EMGSMPSPVA571PLPTRTEGVI581DMRSMSSIDS591FISCATDFPE
601-650601ATRFSHSPLA611SLSGKSGGST621APEVGWRGAL631GASGGRLMET641NPIPEASRSG
651-700651FFVESPRSSM661KTHNPMKLRA671LKVNFLEGDP681TPLLPALGLY691HDPLRNRGGA
701-750701AAAVAGLECA711SLLDKPVLSP721ESSIYTTASA731RTPPRSPEKH741TAIAFNFEAG
751-800751VHQYIDTDTD761DEGQLLYSVD771SSPPKSLHGS781TSPKFSLGAR791TEKNHFESSP
801-850801LPTSPKFLRP811NCVYASEGLP821GKGPGAQEKC831KLENHTSPDV841HMLPGGGAHG
851-857851STRDQSI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 29 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.97
|
|
| 63 | - | - | - |
Deep-Palm: 0.96
|
|
| 73 | - | - | - |
Deep-Palm: 0.09
|
|
| 111 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.08
|
|
| 132 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.17
|
|
| 133 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.19
|
|
| 167 | SWISSPALM DBPTM CYSMODDB | - |
Brain
(34200797)
Forebrain
(28680068)
|
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.98
|
| 168 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
GPS-Palm: 0.88
Deep-Palm: 0.97
|
| 236 | - | - | - |
Deep-Palm: 0.14
|
|
| 397 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.93
|
|
| 398 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.95
|
|
| 594 | - | - | - |
Deep-Palm: 0.31
|
|
| 709 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.98
|
|
| 812 | - |
brain
(39008777)
| - |
GPS-Palm: 0.79
Deep-Palm: 0.94
|
|
| 830 | - | - | - |
Deep-Palm: 0.84
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain
Specificity: 0.111
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
8
Brain tissue (Mass)
Specificity: 0.889
8/56 (14.3%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.