Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q05793 | Hspg2 | Basement membrane-specific heparan sulfate proteoglycan … | Mus musculus (Mouse) | 3707 aa |
Protein Details: Q05793 (Hspg2)
Protein Information
| Accession | Q05793 |
|---|---|
| Protein Names | Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) (Perlecan) [Cleaved into: Endorepellin; LG3 peptide] |
| Gene Symbol | Hspg2 |
| Organism | Mus musculus (Mouse) |
| Length | 3707 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGQRAVGSLL11LGLLLHARLL21AVTHGLRAYD31GLSLPEDTET41VTASRYGWTY
51-10051SYLSDDEDLL61ADDASGDGLG71SGDVGSGDFQ81MVYFRALVNF91TRSIEYSPQL
101-150101EDASAKEFRE111VSEAVVEKLE121PEYRKIPGDQ131IVSVVFIKEL141DGWVFVELDV
151-200151GSEGNADGSQ161IQEVLHTVVS171SGSIGPYVTS181PWGFKFRRLG191TVPQFPRVCT
201-250201ETEFACHSYN211ECVALEYRCD221RRPDCRDMSD231ELNCEEPVPE241LSSSTPAVGK
251-300251VSPLPLWPEA261ATTPPPPVTH271GPQFLLPSVP281GPSACGPQEA291SCHSGHCIPR
301-350301DYLCDGQEDC311RDGSDELGCA321SPPPCEPNEF331ACENGHCALK341LWRCDGDFDC
351-400351EDRTDEANCS361VKQPGEVCGP371THFQCVSTNR381CIPASFHCDE391ESDCPDRSDE
401-450401FGCMPPQVVT411PPQQSIQASR421GQTVTFTCVA431TGVPTPIINW441RLNWGHIPAH
451-500451PRVTMTSEGG461RGTLIIRDVK471EADQGAYTCE481AMNSRGMVFG491IPDGVLELVP
501-550501QRGPCPDGHF511YLEDSASCLP521CFCFGVTNVC531QSSLRFRDQI541RLSFDQPNDF
551-600551KGVNVTMPSQ561PGVPPLSSTQ571LQIDPALQEF581QLVDLSRRFL591VHDAFWALPK
601-650601QFLGNKVDSY611GGFLRYKVRY621ELARGMLEPV631QKPDVILVGA641GYRLHSRGHT
651-700651PTHPGTLNQR661QVQLSEEHWV671HESGRPVQRA681EMLQALASLE691AVLLQTVYNT
701-750701KMASVGLSDI711VMDTTVTHTT721IHGRAHSVEE731CRCPIGYSGL741SCESCDAHFT
751-800751RVPGGPYLGT761CSGCNCNGHA771SSCDPVYGHC781LNCQHNTEGP791QCDKCKPGFF
801-850801GDATKATATA811CRPCPCPYID821ASRRFSDTCF831LDTDGQATCD841ACAPGYTGRR
851-900851CESCAPGYEG861NPIQPGGKCR871PTTQEIVRCD881ERGSLGTSGE891TCRCKNNVVG
901-950901RLCNECSDGS911FHLSKQNPDG921CLKCFCMGVS931RQCSSSSWSR941AQVLGASEQP
951-1000951SQFSLSNAAG961THTTSEGVSS971PAPGELSFSS981FHNLLSEPYF991WSLPASFRGD
1001-10501001KVTSYGGELR1011FTVMQRPRPS1021SAPLHRQPLV1031VLQGNNIVLE1041HHASRDPSPG
1051-11001051QPSNFIVPFQ1061EQAWQRPDGQ1071PATREHLLMA1081LAGIDALLIQ1091ASYTQQPAES
1101-11501101RLSGISMDVA1111VPENTGQDSA1121REVEQCTCPP1131GYRGPSCQDC1141DTGYTRVPSG
1151-12001151LYLGTCERCN1161CHGHSETCEP1171ETGACQSCQH1181HTEGASCEQC1191QPGYYGDAQR
1201-12501201GTPQDCQPCP1211CYGAPAAGQA1221AHTCFLDTDG1231HPTCDSCSPG1241HSGRHCERCA
1251-13001251PGYYGNPSQG1261QPCHRDGQVP1271EVLGCGCDPH1281GSISSQCDAA1291GQCQCKAQVE
1301-13501301GRSCSHCRPH1311HFHLSASNPE1321GCLPCFCMGV1331TQQCASSSYS1341RQLISTHFAP
1351-14001351GDFQGFALVN1361PQRNSQLTGG1371FTVEPVHDGA1381RLSFSNFAHL1391GQESFYWQLP
1401-14501401EIYQGDKVAA1411YGGKLRYTLS1421YTAGPQGSPL1431LDPDIQITGN1441NIMLVASQPA
1451-15001451LQGPERRSYE1461IIFREEFWRR1471PDGQPATREH1481LLMALADLDE1491LLVRATFSSV
1501-15501501PRAASISAVS1511LEGAQPGPSS1521GPRALEVEEC1531RCPPGYVGLS1541CQDCAPGYTR
1551-16001551TGSGLYLGQC1561ELCECNGHSD1571LCHPETGACS1581RCQHNTAGEF1591CELCATGYYG
1601-16501601DATAGTPEDC1611QPCACPLTNP1621ENMFSRTCES1631LGAGGYRCTA1641CEPGYTGQYC
1651-17001651EQCAPGYEGD1661PNVQGGRCQP1671LTKESLEVQI1681HPSRSVVPQG1691GPHSLRCQVS
1701-17501701GSPPHYFYWS1711REDGRPLPSS1721AQQRHQGSEL1731HFPSVQPSDA1741GVYICTCRNL
1751-18001751IHTSNSRAEL1761LVAEAPSKPI1771MVTVEEQRSQ1781SVRPGADVTF1791ICTAKSKSPA
1801-18501801YTLVWTRLHN1811GKLPSRAMDF1821NGILTIRNVQ1831PSDAGTYVCT1841GSNMFAMDQG
1851-19001851TATLHVQVSG1861TSTAPVASIH1871PPQLTVQPGQ1881QAEFRCSATG1891NPTPMLEWIG
1901-19501901GPSGQLPAKA1911QIHNGILRLP1921AIEPSDQGQY1931LCRALSSAGQ1941HVARAMLQVH
1951-20001951GGSGPRVQVS1961PERTQVHEGR1971TVRLYCRAAG1981VPSASITWRK1991EGGSLPFRHQ
2001-20502001AHGSRLRLHH2011MSVADSGEYV2021CRANNNIDAQ2031ETSIMISVSP2041STNSPPAPAS
2051-21002051PAPIRIESSS2061SRVAEGQTLD2071LNCVVPGHAH2081AQVTWHKRGG2091SLPTHHQTHG
2101-21502101SRLRLYQVSS2111ADSGEYVCSV2121LSSSGPLEAS2131VLVSITPAAA2141NVHIPGVVPP
2151-22002151IRIETSSSRV2161AEGQTLDLSC2171VVPGQAHAQV2181TWHKRGGSLP2191AGHQVHGHML
2201-22502201RLNRVSPADS2211GEYSCQVTGS2221SGTLEASVLV2231TIEASEPSPI2241PAPGLAQPVY
2251-23002251IESSSSHLTE2261GQTVDLKCVV2271PGQAHAQVTW2281HKRGSSLPAR2291HQTHGSLLRL
2301-23502301YQLSPADSGE2311YVCQVAGSSH2321PEHEASFKLT2331VPSSQNSSFR2341LRSPVISIEP
2351-24002351PSSTVQQGQD2361ASFKCLIHEG2371AMPIKVEWKI2381RDQELEDNVH2391ISPNGSIITI
2401-24502401VAPGPATMEP2411TACVASNVYG2421MAQSVVNLSV2431HGPPTVSVLP2441EGPVHVKMGK
2451-25002451DITLECISSG2461EPRSSPRWTR2471LGIPVKLEPR2481MFGLMNSHAM2491LKIASVKPSD
2501-25502501AGTYVCQAQN2511ALGTAQKQVE2521LIVDTGTVAP2531GTPQVQVEES2541ELTLEAGHTA
2551-26002551TLHCSATGNP2561PPTIHWSKLR2571APLPWQHRIE2581GNTLVIPRVA2591QQDSGQYICN
2601-26502601ATNSAGHTEA2611TVVLHVESPP2621YATIIPEHTS2631AQPGNLVQLQ2641CLAHGTPPLT
2651-27002651YQWSLVGGVL2661PEKAVVRNQL2671LRLEPTVPED2681SGRYRCQVSN2691RVGSAEAFAQ
2701-27502701VLVQGSSSNL2711PDTSIPGGST2721PTVQVTPQLE2731TRNIGASVEF2741HCAVPNERGT
2751-28002751HLRWLKEGGQ2761LPPGHSVQDG2771VLRIQNLDQN2781CQGTYVCQAH2791GPWGQAQATA
2801-28502801QLIVQALPSV2811LINVRTSVHS2821VVVGHSVEFE2831CLALGDPKPQ2841VTWSKVGGHL
2851-29002851RPGIVQSGTI2861IRIAHVELAD2871AGQYRCAATN2881AAGTTQSHVL2891LLVQALPQIS
2901-29502901TPPEIRVPAG2911SAAVFPCMAS2921GYPTPAITWS2931KVDGDLPPDS2941RLENNMLMLP
2951-30002951SVRPEDAGTY2961VCTATNRQGK2971VKAFAYLQVP2981ERVIPYFTQT2991PYSFLPLPTI
3001-30503001KDAYRKFEIK3011ITFRPDSADG3021MLLYNGQKRS3031PTNLANRQPD3041FISFGLVGGR
3051-31003051PEFRFDAGSG3061MATIRHPTPL3071ALGQFHTVTL3081LRSLTQGSLI3091VGNLAPVNGT
3101-31503101SQGKFQGLDL3111NEELYLGGYP3121DYGAIPKAGL3131SSGFVGCVRE3141LRIQGEEIVF
3151-32003151HDVNLTTHGI3161SHCPTCQDRP3171CQNGGQCQDS3181ESSSYTCVCP3191AGFTAAAVNI
3201-32503201RKPCTATPSL3211WADATCVNRP3221DGRGYTCRCH3231LGRSGVRCEE3241GVTVTTPSMS
3251-33003251GAGSYLALPA3261LTNTHHELRL3271DVEFKPLEPN3281GILLFSGGKS3291GPVEDFVSLA
3301-33503301MVGGHLEFRY3311ELGSGLAVLR3321SHEPLALGRW3331HRVSAERLNK3341DGSLRVDGGR
3351-34003351PVLRSSPGKS3361QGLNLHTLLY3371LGGVEPSVQL3381SPATNMSAHF3391HGCVGEVSVN
3401-34503401GKRLDLTYSF3411LGSQGVGQCY3421DSSPCERQPC3431RNGATCMPAG3441EYEFQCLCQD
3451-35003451GFKGDLCEHE3461ENPCQLHEPC3471LNGGTCRGAR3481CLCLPGFSGP3491RCQQGAGYGV
3501-35503501VESDWHPEGS3511GGNDAPGQYG3521AYFYDNGFLG3531LPGNSFSRSL3541PEVPETIEFE
3551-36003551VRTSTADGLL3561LWQGVVREAS3571RSKDFISLGL3581QDGHLVFSYQ3591LGSGEARLVS
3601-36503601GDPINDGEWH3611RITALREGQR3621GSIQVDGEDL3631VTGRSPGPNV3641AVNTKDIIYI
3651-37003651GGAPDVATLT3661RGKFSSGITG3671CIKNLVLHTA3681RPGAPPPQPL3691DLQHRAQAGA
3701-37073701NTRPCPS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 199 | - | - | - |
Deep-Palm: 0.28
|
|
| 206 | - | - | - |
Deep-Palm: 0.04
|
|
| 212 | - | - | - |
Deep-Palm: 0.06
|
|
| 219 | - | - | - |
Deep-Palm: 0.03
|
|
| 225 | - | - | - |
Deep-Palm: 0.05
|
|
| 234 | - | - | - |
Deep-Palm: 0.17
|
|
| 285 | - | - | - |
Deep-Palm: 0.66
|
|
| 292 | - | - | - |
Deep-Palm: 0.19
|
|
| 297 | - | - | - |
Deep-Palm: 0.09
|
|
| 304 | - | - | - |
Deep-Palm: 0.05
|
|
| 310 | - | - | - |
Deep-Palm: 0.07
|
|
| 319 | - | - | - |
Deep-Palm: 0.10
|
|
| 325 | - | - | - |
Deep-Palm: 0.07
|
|
| 332 | - | - | - |
Deep-Palm: 0.09
|
|
| 337 | - | - | - |
Deep-Palm: 0.04
|
|
| 344 | - | - | - |
Deep-Palm: 0.03
|
|
| 350 | - | - | - |
Deep-Palm: 0.04
|
|
| 359 | - | - | - |
Deep-Palm: 0.05
|
|
| 368 | - | - | - |
Deep-Palm: 0.08
|
|
| 375 | - | - | - |
Deep-Palm: 0.07
|
|
| 381 | - | - | - |
Deep-Palm: 0.05
|
|
| 388 | - | - | - |
Deep-Palm: 0.05
|
|
| 394 | - | - | - |
Deep-Palm: 0.04
|
|
| 403 | - | - | - |
Deep-Palm: 0.14
|
|
| 428 | - |
brain
(39008777)
| - |
Deep-Palm: 0.47
|
|
| 479 | - | - | - |
Deep-Palm: 0.33
|
|
| 505 | - | - | - |
Deep-Palm: 0.80
|
|
| 518 | - | - | - |
Deep-Palm: 0.06
|
|
| 521 | - | - | - |
Deep-Palm: 0.10
|
|
| 523 | - | - | - |
Deep-Palm: 0.34
|
|
| 530 | - | - | - |
Deep-Palm: 0.76
|
|
| 731 | - | - | - |
Deep-Palm: 0.06
|
|
| 733 | - | - | - |
Deep-Palm: 0.06
|
|
| 742 | - | - | - |
Deep-Palm: 0.11
|
|
| 745 | - | - | - |
Deep-Palm: 0.12
|
|
| 761 | - | - | - |
Deep-Palm: 0.08
|
|
| 764 | - | - | - |
Deep-Palm: 0.05
|
|
| 766 | - | - | - |
Deep-Palm: 0.03
|
|
| 773 | - | - | - |
Deep-Palm: 0.01
|
|
| 780 | - | - | - |
Deep-Palm: 0.01
|
|
| 783 | - | - | - |
Deep-Palm: 0.01
|
|
| 792 | - | - | - |
Deep-Palm: 0.02
|
|
| 795 | - | - | - |
Deep-Palm: 0.03
|
|
| 811 | - | - | - |
Deep-Palm: 0.67
|
|
| 814 | - | - | - |
Deep-Palm: 0.40
|
|
| 816 | - | - | - |
Deep-Palm: 0.65
|
|
| 829 | - | - | - |
Deep-Palm: 0.20
|
|
| 839 | - | - | - |
Deep-Palm: 0.04
|
|
| 842 | - | - | - |
Deep-Palm: 0.05
|
|
| 851 | - | - | - |
Deep-Palm: 0.03
|
|
| 854 | - | - | - |
Deep-Palm: 0.06
|
|
| 869 | - |
brain
(39008777)
| - |
Deep-Palm: 0.20
|
|
| 879 | - | - | - |
Deep-Palm: 0.43
|
|
| 892 | - |
MLE
(39008777)
| - |
Deep-Palm: 0.09
|
|
| 894 | - | - | - |
Deep-Palm: 0.06
|
|
| 903 | - | - | - |
Deep-Palm: 0.04
|
|
| 906 | - | - | - |
Deep-Palm: 0.03
|
|
| 921 | - | - | - |
Deep-Palm: 0.07
|
|
| 924 | - | - | - |
Deep-Palm: 0.07
|
|
| 926 | - | - | - |
Deep-Palm: 0.15
|
|
| 933 | - |
brain
(39008777)
| - |
Deep-Palm: 0.78
|
|
| 1126 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.08
|
|
| 1128 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.06
|
|
| 1137 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.03
|
|
| 1140 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.08
|
|
| 1156 | - |
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.05
|
|
| 1159 | - | - | - |
Deep-Palm: 0.04
|
|
| 1161 | - | - | - |
Deep-Palm: 0.03
|
|
| 1168 | - | - | - |
Deep-Palm: 0.01
|
|
| 1175 | - | - | - |
Deep-Palm: 0.02
|
|
| 1178 | - | - | - |
Deep-Palm: 0.02
|
|
| 1187 | - | - | - |
Deep-Palm: 0.02
|
|
| 1190 | - | - | - |
Deep-Palm: 0.02
|
|
| 1206 | - | - | - |
Deep-Palm: 0.18
|
|
| 1209 | - | - | - |
Deep-Palm: 0.11
|
|
| 1211 | - | - | - |
Deep-Palm: 0.17
|
|
| 1224 | - | - | - |
Deep-Palm: 0.04
|
|
| 1234 | - | - | - |
Deep-Palm: 0.02
|
|
| 1237 | - | - | - |
Deep-Palm: 0.02
|
|
| 1246 | - | - | - |
Deep-Palm: 0.02
|
|
| 1249 | - | - | - |
Deep-Palm: 0.02
|
|
| 1263 | - | - | - |
Deep-Palm: 0.13
|
|
| 1275 | - | - | - |
Deep-Palm: 0.40
|
|
| 1277 | - | - | - |
Deep-Palm: 0.15
|
|
| 1287 | - | - | - |
Deep-Palm: 0.09
|
|
| 1293 | - | - | - |
Deep-Palm: 0.03
|
|
| 1295 | - | - | - |
Deep-Palm: 0.02
|
|
| 1304 | - | - | - |
Deep-Palm: 0.03
|
|
| 1307 | - | - | - |
Deep-Palm: 0.03
|
|
| 1322 | - | - | - |
Deep-Palm: 0.08
|
|
| 1325 | - | - | - |
Deep-Palm: 0.08
|
|
| 1327 | - | - | - |
Deep-Palm: 0.30
|
|
| 1334 | - | - | - |
Deep-Palm: 0.42
|
|
| 1530 | - |
MLE
(39008777)
| - |
Deep-Palm: 0.58
|
|
| 1532 | - |
MLE
(39008777)
| - |
Deep-Palm: 0.52
|
|
| 1541 | - |
MLE
(39008777)
| - |
Deep-Palm: 0.32
|
|
| 1544 | - |
MLE
(39008777)
| - |
Deep-Palm: 0.38
|
|
| 1560 | - | - | - |
Deep-Palm: 0.29
|
|
| 1563 | - | - | - |
Deep-Palm: 0.19
|
|
| 1565 | - | - | - |
Deep-Palm: 0.14
|
|
| 1572 | - | - | - |
Deep-Palm: 0.02
|
|
| 1579 | - | - | - |
Deep-Palm: 0.02
|
|
| 1582 | - | - | - |
Deep-Palm: 0.03
|
|
| 1591 | - | - | - |
Deep-Palm: 0.08
|
|
| 1594 | - | - | - |
Deep-Palm: 0.06
|
|
| 1610 | - | - | - |
Deep-Palm: 0.08
|
|
| 1613 | - | - | - |
Deep-Palm: 0.06
|
|
| 1615 | - | - | - |
Deep-Palm: 0.13
|
|
| 1628 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.45
|
| 1638 | - | - | - |
Deep-Palm: 0.05
|
|
| 1641 | - | - | - |
Deep-Palm: 0.06
|
|
| 1650 | - | - | - |
Deep-Palm: 0.02
|
|
| 1653 | - | - | - |
Deep-Palm: 0.03
|
|
| 1668 | - | - | - |
Deep-Palm: 0.61
|
|
| 1697 | - | - | - |
Deep-Palm: 0.66
|
|
| 1745 | - | - | - |
Deep-Palm: 0.37
|
|
| 1747 | - | - | - |
Deep-Palm: 0.58
|
|
| 1792 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.92
Deep-Palm: 0.68
|
|
| 1839 | - | - | - |
Deep-Palm: 0.21
|
|
| 1886 | - | - | - |
Deep-Palm: 0.27
|
|
| 1932 | - |
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.90
|
|
| 1976 | - | - | - |
Deep-Palm: 0.84
|
|
| 2021 | - | - | - |
Deep-Palm: 0.13
|
|
| 2073 | - | - | - |
Deep-Palm: 0.87
|
|
| 2118 | - | - | - |
Deep-Palm: 0.92
|
|
| 2170 | - | - | - |
Deep-Palm: 0.95
|
|
| 2215 | - | - | - |
Deep-Palm: 0.92
|
|
| 2268 | - | - | - |
Deep-Palm: 0.56
|
|
| 2313 | - | - | - |
Deep-Palm: 0.67
|
|
| 2365 | - | - | - |
Deep-Palm: 0.32
|
|
| 2413 | - | - | - |
Deep-Palm: 0.50
|
|
| 2456 | - | - | - |
Deep-Palm: 0.72
|
|
| 2506 | - | - | - |
Deep-Palm: 0.97
|
|
| 2554 | - | - | - |
Deep-Palm: 0.77
|
|
| 2599 | - | - | - |
Deep-Palm: 0.38
|
|
| 2641 | - | - | - |
Deep-Palm: 0.47
|
|
| 2686 | - | - | - |
Deep-Palm: 0.94
|
|
| 2742 | - | - | - |
Deep-Palm: 0.51
|
|
| 2781 | - | - | - |
Deep-Palm: 0.32
|
|
| 2787 | - | - | - |
Deep-Palm: 0.35
|
|
| 2831 | - | - | - |
Deep-Palm: 0.60
|
|
| 2876 | - | - | - |
Deep-Palm: 0.61
|
|
| 2917 | - | - | - |
Deep-Palm: 0.47
|
|
| 2962 | - | - | - |
Deep-Palm: 0.73
|
|
| 3137 | - |
brain
(39008777)
MLE
(39008777)
| - |
GPS-Palm: 0.94
Deep-Palm: 0.84
|
|
| 3163 | - | - | - |
Deep-Palm: 0.02
|
|
| 3166 | - | - | - |
Deep-Palm: 0.02
|
|
| 3171 | - | - | - |
Deep-Palm: 0.02
|
|
| 3177 | - | - | - |
Deep-Palm: 0.01
|
|
| 3187 | - | - | - |
Deep-Palm: 0.08
|
|
| 3189 | - | - | - |
Deep-Palm: 0.11
|
|
| 3204 | - | - | - |
Deep-Palm: 0.47
|
|
| 3216 | - | - | - |
Deep-Palm: 0.09
|
|
| 3227 | - | - | - |
Deep-Palm: 0.29
|
|
| 3229 | - | - | - |
Deep-Palm: 0.36
|
|
| 3238 | - | - | - |
Deep-Palm: 0.36
|
|
| 3393 | - | - | - |
Deep-Palm: 0.64
|
|
| 3419 | - | - | - |
Deep-Palm: 0.16
|
|
| 3425 | - | - | - |
Deep-Palm: 0.04
|
|
| 3430 | - | - | - |
Deep-Palm: 0.02
|
|
| 3436 | - | - | - |
Deep-Palm: 0.02
|
|
| 3446 | - | - | - |
Deep-Palm: 0.08
|
|
| 3448 | - | - | - |
Deep-Palm: 0.08
|
|
| 3457 | - | - | - |
Deep-Palm: 0.02
|
|
| 3464 | - | - | - |
Deep-Palm: 0.04
|
|
| 3470 | - | - | - |
Deep-Palm: 0.05
|
|
| 3476 | - | - | - |
Deep-Palm: 0.09
|
|
| 3481 | - |
brain
(39008777)
MLE
(39008777)
| - |
Deep-Palm: 0.17
|
|
| 3483 | - |
brain
(39008777)
MLE
(39008777)
| - |
Deep-Palm: 0.18
|
|
| 3492 | - | - | - |
Deep-Palm: 0.80
|
|
| 3671 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.96
|
|
| 3705 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
Liver
Specificity: 0.250
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
12
Brain tissue (Mass)
Specificity: 0.750
12/56 (21.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.