Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q05816 | Fabp5 | Fatty acid-binding protein 5 (Epidermal-type … | Mus musculus (Mouse) | 135 aa |
Protein Details: Q05816 (Fabp5)
Protein Information
| Accession | Q05816 |
|---|---|
| Protein Names | Fatty acid-binding protein 5 (Epidermal-type fatty acid-binding protein) (E-FABP) (Fatty acid-binding protein, epidermal) (Keratinocyte lipid-binding protein) (Psoriasis-associated fatty acid-binding protein homolog) (PA-FABP) |
| Gene Symbol | Fabp5 |
| Organism | Mus musculus (Mouse) |
| Length | 135 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 29733200 34200797 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASLKDLEGK11WRLMESHGFE21EYMKELGVGL31ALRKMAAMAK41PDCIITCDGN
51-10051NITVKTESTV61KTTVFSCNLG71EKFDETTADG81RKTETVCTFQ91DGALVQHQQW
101-135101DGKESTITRK111LKDGKMIVEC121VMNNATCTRV131YEKVQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 43 | SWISSPALM DBPTM CYSMODDB | Intracellular lipid binding protein Calycin |
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.88
|
| 47 | Intracellular lipid binding protein Calycin | - |
Brain
(35358180)
|
Deep-Palm: 0.84
|
|
| 67 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.92
|
| 87 | - |
Brain
(34200797)
|
Brain
(35358180)
|
Deep-Palm: 0.62
|
|
| 120 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.90
|
| 127 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.556
5
Brain
Specificity: 0.152
5/5 (100.0%)
4
Liver
Specificity: 0.121
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
24
Brain tissue (Mass)
Specificity: 0.727
24/56 (42.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.