Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q05920 | Pc | Pyruvate carboxylase, mitochondrial (EC 6.4.1.1) … | Mus musculus (Mouse) | 1178 aa |
Protein Details: Q05920 (Pc)
Protein Information
| Accession | Q05920 |
|---|---|
| Protein Names | Pyruvate carboxylase, mitochondrial (EC 6.4.1.1) (Pyruvic carboxylase) (PCB) |
| Gene Symbol | Pc |
| Organism | Mus musculus (Mouse) |
| Length | 1178 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34200797 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLKFQTVRGG11LRLLGVRRSS21SAPVASPNVR31RLEYKPIKKV41MVANRGEIAI
51-10051RVFRACTELG61IRTVAVYSEQ71DTGQMHRQKA81DEAYLIGRGL91APVQAYLHIP
101-150101DIIKVAKENG111VDAVHPGYGF121LSERADFAQA131CQDAGVRFIG141PSPEVVRKMG
151-200151DKVEARAIAI161AAGVPVVPGT171DSPISSLHEA181HEFSNTFGFP191IIFKAAYGGG
201-250201GRGMRVVHSY211EELEENYTRA221YSEALAAFGN231GALFVEKFIE241KPRHIEVQIL
251-300251GDQYGNILHL261YERDCSIQRR271HQKVVEIAPA281THLDPQLRSR291LTSDSVKLAK
301-350301QVGYENAGTV311EFLVDKHGKH321YFIEVNSRLQ331VEHTVTEEIT341DVDLVHAQIH
351-400351VSEGRSLPDL361GLRQENIRIN371GCAIQCRVTT381EDPARSFQPD391TGRIEVFRSG
401-450401EGMGIRLDNA411SAFQGAVISP421HYDSLLVKVI431AHGKDHPTAA441TKMSRALAEF
451-500451RVRGVKTNIP461FLQNVLNNQQ471FLAGTVDTQF481IDENPELFQL491RPAQNRAQKL
501-550501LHYLGHVMVN511GPTTPIPVNV521SPSPVDPAVP531VVPIGPPPAG541FRDILLREGP
551-600551EGFARAVRNH561QGLLLMDTTF571RDAHQSLLAT581RVRTHDLKKI591APYVAHNFNK
601-650601LFSMENWGGA611TFDVAMRFLY621ECPWRRLQEL631RELIPNIPFQ641MLLRGANAVG
651-700651YTNYPDNVVF661KFCEVAKENG671MDVFRVFDSL681NYLPNMLLGM691EAAGSAGGVV
701-750701EAAISYTGDV711ADPSRTKYSL721EYYMGLAEEL731VRAGTHILCI741KDMAGLLKPA
751-800751ACTMLVSSLR761DRFPDLPLHI771HTHDTSGAGV781AAMLACAQAG791ADVVDVAVDS
801-850801MSGMTSQPSM811GALVACTKGT821PLDTEVPLER831VFDYSEYWEG841ARGLYAAFDC
851-900851TATMKSGNSD861VYENEIPGGQ871YTNLHFQAHS881MGLGSKFKEV891KKAYVEANQM
901-950901LGDLIKVTPS911SKIVGDLAQF921MVQNGLSRAE931AEAQAEELSF941PRSVVEFLQG
951-1000951YIGIPHGGFP961EPFRSKVLKD971LPRIEGRPGA981SLPPLNLKEL991EKDLIDRHGE
1001-10501001EVTPEDVLSA1011AMYPDVFAQF1021KDFTATFGPL1031DSLNTRLFLQ1041GPKIAEEFEV
1051-11001051ELERGKTLHI1061KALAVSDLNR1071AGQRQVFFEL1081NGQLRSILVK1091DTQAMKEMHF
1101-11501101HPKALKDVKG1111QIGAPMPGKV1121IDIKVAAGDK1131VAKGQPLCVL1141SAMKMETVVT
1151-11781151SPMEGTIRKV1161HVTKDMTLEG1171DDLILEIE
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 56 | SWISSPALM DBPTM CYSMODDB | Biotin carboxylase N-terminal domain |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.93
Deep-Palm: 0.96
|
| 131 | SWISSPALM DBPTM CYSMODDB | Biotin carboxylase N-terminal domain |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.96
|
| 265 | - | - | - |
Deep-Palm: 0.77
|
|
| 372 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.94
Deep-Palm: 0.95
|
| 376 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.92
Deep-Palm: 0.67
|
| 622 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.94
Deep-Palm: 0.97
|
| 663 | SWISSPALM DBPTM CYSMODDB | - | - | - |
Deep-Palm: 0.10
|
| 739 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.92
Deep-Palm: 0.98
|
| 752 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.98
|
| 786 | - | - | - |
Deep-Palm: 0.93
|
|
| 816 | - | - | - |
Deep-Palm: 0.95
|
|
| 850 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.68
|
|
| 1138 | - | - | - |
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.571
4
Liver
Specificity: 0.133
4/4 (100.0%)
3
Brain
Specificity: 0.100
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
23
Brain tissue (Mass)
Specificity: 0.767
23/56 (41.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.