Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q0VAX3 | Fads2b | Fatty acid desaturase 2-like protein … | Mus musculus (Mouse) | 487 aa |
Protein Details: Q0VAX3 (Fads2b)
Protein Information
| Accession | Q0VAX3 |
|---|---|
| Protein Names | Fatty acid desaturase 2-like protein FADS2B (Fatty acid desaturase 2B, pseudogene) |
| Gene Symbol | Fads2b |
| Organism | Mus musculus (Mouse) |
| Length | 487 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MKLEEKLEHN11ESLVGKSRPC21LHDTHQANGK31PIANGNPTAN41GKVEVYEKQE
51-10051ANGKGNRLGK61CLNLYTWQEI71QRHSQEADQW81LVIDRKVYNV91TDWAGKHPGG
101-150101RRVLNHYAGQ111DATDAFRAMH121LDLGMVKLYL131KPLLIGELSP141EEPSQEKNKN
151-200151AQLVEDFREL161RKTLEAMNMF171SANLRFFFLH181LAQILILEIS191AWLILHHFGS
201-250201SWLVTILISF211LLTVSQAQCS221FLQHDLGHLS231MFKKSKWNHL241MHKFVMCHLK
251-300251GLSADWWNYR261HFQHHVKPNI271YPKDPDIDVG281PLFLVGDTQP291IKYGKKKIKY
301-350301IDYEKQHLYF311YMVALPFLMP321VYFNLQSMQV331MYLRKYWMDI341AWVSSFYIRY
351-400351FITFGPFYGI361FGTVLLIYLV371KFIESPWIAY381VTQMSHIPMK391MSSEENHDWL
401-450401STQVVATCNI411EQSFFNDWFT421GHLNFQIEHH431LFPTMPRHNY441HKVAPLVKSL
451-487451CAKHGLQYIN461KPILKAFGDI471VRSLKKSASL481WMNAYYE
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 20 | - | - | - |
Deep-Palm: 0.79
|
|
| 61 | - | - | - |
Deep-Palm: 0.84
|
|
| 219 | - | - | - |
Deep-Palm: 0.33
|
|
| 247 | - | - | - |
Deep-Palm: 0.04
|
|
| 408 | - | - | - |
Deep-Palm: 0.03
|
|
| 451 | SWISSPALM DBPTM CYSMODDB | Fatty acid desaturase |
Liver
(28526873)
| - |
GPS-Palm: 0.95
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Liver
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.