Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q0VBD0 | Itgb8 | Integrin beta-8 | Mus musculus (Mouse) | 767 aa |
Protein Details: Q0VBD0 (Itgb8)
Protein Information
| Accession | Q0VBD0 |
|---|---|
| Protein Names | Integrin beta-8 |
| Gene Symbol | Itgb8 |
| Organism | Mus musculus (Mouse) |
| Length | 767 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MCGSALAFLT11AALLSLHNCQ21RGPALVLGAA31WVFSLVLGLG41QSEHNRCGSA
51-10051NVVSCARCLQ61LGPECGWCVQ71EDFVSGGSGS81ERCDTVSSLI91SKGCPVDSIE
101-150101YLSVHVVTSS111ENEINTQVTP121GEVSVQLHPG131AEANFMLKVR141PLKKYPVDLY
151-200151YLVDVSASMH161NNIEKLNSVG171NDLSKKMALY181SRDFRLGFGS191YVDKTVSPYI
201-250201SIHPERIHNQ211CSDYNLDCMP221PHGYIHVLSL231TENITEFEKA241VHRQKISGNI
251-300251DTPEGGFDAM261LQAAVCESHI271GWRKEAKRLL281LVMTDQTSHL291ALDSKLAGIV
301-350301VPNDGNCHLK311NNVYVKSTTM321EHPSLGQLSE331KLIDNNINVI341FAVQGKQFHW
351-400351YKDLLPLLPG361AIAGEIESKA371ANLNNLVVEA381YKKIISEVKV391QLENQVHGVH
401-450401FNITAICPDG411ARKPGISGCG421NVTSNDEVLF431NVTVVMKTCD441IMGGKNYAII
451-500451KPIGFNETTK461VHIHRSCSCQ471CENHRGLKGQ481CAEAAPDPKC491PQCDDSRCHF
501-550501DEDQFPSETC511KPQEDQPVCS521GRGVCICGKC531LCHKTKLGRV541YGQYCEKDDF
551-600551SCPYLHGDVC561AGHGECEGGR571CQCFSGWEGD581RCQCPSASAQ591HCVNSKGQVC
601-650601SGRGTCVCGR611CECTDPRSIG621RLCEHCPTCH631LSCSENWNCL641QCLHPHNLSQ
651-700651AALDQCKSSC661AVMEQHRMDQ671TSECLSGPSY681LRIFFIIFIV691TFLIGLLKVL
701-750701IIRQVILQWN711NNKIKSSSDY721RMSASKKDKL731ILQSVCTRAV741TYRREKPEEI
751-767751KMDISKLNAQ761EAFRCNF
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 2 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.04
|
|
| 19 | - | - | - |
Deep-Palm: 0.98
|
|
| 47 | Integrin beta N-terminal Plexin repeat | - |
Brain
(35358180)
|
Deep-Palm: 0.94
|
|
| 55 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.10
|
|
| 58 | - | - | - |
Deep-Palm: 0.08
|
|
| 65 | - | - | - |
Deep-Palm: 0.47
|
|
| 68 | - | - | - |
Deep-Palm: 0.52
|
|
| 83 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.84
|
|
| 94 | - | - | - |
Deep-Palm: 0.87
|
|
| 211 | - | - | - |
Deep-Palm: 0.03
|
|
| 218 | - | - | - |
Deep-Palm: 0.04
|
|
| 266 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.96
|
|
| 307 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.36
|
|
| 407 | - | - | - |
Deep-Palm: 0.23
|
|
| 419 | - | - | - |
Deep-Palm: 0.59
|
|
| 439 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.17
|
|
| 467 | - |
brain
(39008777)
| - |
Deep-Palm: 0.03
|
|
| 469 | - |
brain
(39008777)
| - |
Deep-Palm: 0.03
|
|
| 471 | - |
brain
(39008777)
| - |
Deep-Palm: 0.05
|
|
| 481 | - |
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.04
|
|
| 490 | - | - | - |
Deep-Palm: 0.05
|
|
| 493 | - | - | - |
Deep-Palm: 0.03
|
|
| 498 | - | - | - |
Deep-Palm: 0.03
|
|
| 510 | - | - | - |
Deep-Palm: 0.07
|
|
| 519 | - | - | - |
Deep-Palm: 0.08
|
|
| 525 | - |
brain
(39008777)
| - |
Deep-Palm: 0.27
|
|
| 527 | - |
brain
(39008777)
| - |
Deep-Palm: 0.27
|
|
| 530 | - | - | - |
Deep-Palm: 0.15
|
|
| 532 | - | - | - |
Deep-Palm: 0.20
|
|
| 545 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.05
|
|
| 552 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.08
|
|
| 560 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.04
|
|
| 566 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.02
|
|
| 571 | - | - | - |
Deep-Palm: 0.02
|
|
| 573 | - | - | - |
Deep-Palm: 0.02
|
|
| 582 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.03
|
|
| 584 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.02
|
|
| 592 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.05
|
|
| 600 | - | - | - |
Deep-Palm: 0.05
|
|
| 606 | - | - | - |
Deep-Palm: 0.06
|
|
| 608 | - | - | - |
Deep-Palm: 0.10
|
|
| 611 | - | - | - |
Deep-Palm: 0.08
|
|
| 613 | - | - | - |
Deep-Palm: 0.06
|
|
| 623 | - | - | - |
Deep-Palm: 0.02
|
|
| 626 | - | - | - |
Deep-Palm: 0.02
|
|
| 629 | - | - | - |
Deep-Palm: 0.02
|
|
| 633 | - | - | - |
Deep-Palm: 0.02
|
|
| 639 | - | - | - |
Deep-Palm: 0.04
|
|
| 642 | - | - | - |
Deep-Palm: 0.05
|
|
| 656 | - | - | - |
Deep-Palm: 0.07
|
|
| 660 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.13
|
|
| 674 | - | - | - |
Deep-Palm: 0.38
|
|
| 736 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.94
Deep-Palm: 0.91
|
| 765 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
14
Brain tissue (Mass)
Specificity: 1.000
14/56 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.