Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q13639 | HTR4 | 5-hydroxytryptamine receptor 4 (5-HT-4) (5-HT4) … | Homo sapiens (Human) | 388 aa |
Protein Details: Q13639 (HTR4)
Protein Information
| Accession | Q13639 |
|---|---|
| Protein Names | 5-hydroxytryptamine receptor 4 (5-HT-4) (5-HT4) (Serotonin receptor 4) |
| Gene Symbol | HTR4 |
| Organism | Homo sapiens (Human) |
| Length | 388 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDKLDANVSS11EEGFGSVEKV21VLLTFLSTVI31LMAILGNLLV41MVAVCWDRQL
51-10051RKIKTNYFIV61SLAFADLLVS71VLVMPFGAIE81LVQDIWIYGE91VFCLVRTSLD
101-150101VLLTTASIFH111LCCISLDRYY121AICCQPLVYR131NKMTPLRIAL141MLGGCWVIPT
151-200151FISFLPIMQG161WNNIGIIDLI171EKRKFNQNSN181STYCVFMVNK191PYAITCSVVA
201-250201FYIPFLLMVL211AYYRIYVTAK221EHAHQIQMLQ231RAGASSESRP241QSADQHSTHR
251-300251MRTETKAAKT261LCIIMGCFCL271CWAPFFVTNI281VDPFIDYTVP291GQVWTAFLWL
301-350301GYINSGLNPF311LYAFLNKSFR321RAFLIILCCD331DERYRRPSIL341GQTVPCSTTT
351-388351INGSTHVLRD361AVECGGQWES371QCHPPATSPL381VAAQPSDT
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 45 | G protein-coupled receptor, rhodopsin-like GPCR, rhodopsin-like, 7TM ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR Family A G protein-coupled receptor-like | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.86
|
|
| 93 | - | - | - |
Deep-Palm: 0.91
|
|
| 112 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.17
|
|
| 113 | - | - | - |
Deep-Palm: 0.17
|
|
| 123 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.06
|
|
| 124 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.10
|
|
| 145 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.74
|
|
| 184 | - | - | - |
Deep-Palm: 0.08
|
|
| 196 | - | - | - |
Deep-Palm: 0.04
|
|
| 262 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.06
|
|
| 267 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.03
|
|
| 269 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.04
|
|
| 271 | - | - | - |
Deep-Palm: 0.02
|
|
| 328 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.91
|
| 329 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.91
|
| 346 | - | - | - |
Deep-Palm: 0.84
|
|
| 364 | - | - | - |
Deep-Palm: 0.22
|
|
| 372 | - | - | - |
Deep-Palm: 0.63
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 137 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 137 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 250 | R → C | 0.002545 | SNP | Missense Mutation | GBM |
| 250 | R → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 302 | Y → C | 0.002506 | SNP | Missense Mutation | COAD |
| 372* | C → ? | 0.001969 | SNP | Nonsense Mutation | HNSC |