Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q13733 | ATP1A4 | Sodium/potassium-transporting ATPase subunit alpha-4 (Na(+)/K(+) … | Homo sapiens (Human) | 1029 aa |
Protein Details: Q13733 (ATP1A4)
Protein Information
| Accession | Q13733 |
|---|---|
| Protein Names | Sodium/potassium-transporting ATPase subunit alpha-4 (Na(+)/K(+) ATPase alpha-4 subunit) (EC 7.2.2.13) (Sodium pump subunit alpha-4) |
| Gene Symbol | ATP1A4 |
| Organism | Homo sapiens (Human) |
| Length | 1029 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGLWGKKGTV11APHDQSPRRR21PKKGLIKKKM31VKREKQKRNM41EELKKEVVMD
51-10051DHKLTLEELS61TKYSVDLTKG71HSHQRAKEIL81TRGGPNTVTP91PPTTPEWVKF
101-150101CKQLFGGFSL111LLWTGAILCF121VAYSIQIYFN131EEPTKDNLYL141SIVLSVVVIV
151-200151TGCFSYYQEA161KSSKIMESFK171NMVPQQALVI181RGGEKMQINV191QEVVLGDLVE
201-250201IKGGDRVPAD211LRLISAQGCK221VDNSSLTGES231EPQSRSPDFT241HENPLETRNI
251-300251CFFSTNCVEG261TARGIVIATG271DSTVMGRIAS281LTSGLAVGQT291PIAAEIEHFI
301-350301HLITVVAVFL311GVTFFALSLL321LGYGWLEAII331FLIGIIVANV341PEGLLATVTV
351-400351CLTLTAKRMA361RKNCLVKNLE371AVETLGSTST381ICSDKTGTLT391QNRMTVAHMW
401-450401FDMTVYEADT411TEEQTGKTFT421KSSDTWFMLA431RIAGLCNRAD441FKANQEILPI
451-500451AKRATTGDAS461ESALLKFIEQ471SYSSVAEMRE481KNPKVAEIPF491NSTNKYQMSI
501-550501HLREDSSQTH511VLMMKGAPER521ILEFCSTFLL531NGQEYSMNDE541MKEAFQNAYL
551-600551ELGGLGERVL561GFCFLNLPSS571FSKGFPFNTD581EINFPMDNLC591FVGLISMIDP
601-650601PRAAVPDAVS611KCRSAGIKVI621MVTGDHPITA631KAIAKGVGII641SEGTETAEEV
651-700651AARLKIPISK661VDASAAKAIV671VHGAELKDIQ681SKQLDQILQN691HPEIVFARTS
701-750701PQQKLIIVEG711CQRLGAVVAV721TGDGVNDSPA731LKKADIGIAM741GISGSDVSKQ
751-800751AADMILLDDN761FASIVTGVEE771GRLIFDNLKK781SIMYTLTSNI791PEITPFLMFI
801-850801ILGIPLPLGT811ITILCIDLGT821DMVPAISLAY831ESAESDIMKR841LPRNPKTDNL
851-900851VNHRLIGMAY861GQIGMIQALA871GFFTYFVILA881ENGFRPVDLL891GIRLHWEDKY
901-950901LNDLEDSYGQ911QWTYEQRKVV921EFTCQTAFFV931TIVVVQWADL941IISKTRRNSL
951-1000951FQQGMRNKVL961IFGILEETLL971AAFLSYTPGM981DVALRMYPLK991ITWWLCAIPY
1001-10291001SILIFVYDEI1011RKLLIRQHPD1021GWVERETYY
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 101 | - | - | - |
Deep-Palm: 0.92
|
|
| 119 | - | - | - |
Deep-Palm: 0.63
|
|
| 153 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.75
|
|
| 219 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.98
|
|
| 251 | - | - |
cerebral cortex
(36430497)
|
Deep-Palm: 0.42
|
|
| 257 | - | - |
cerebral cortex
(36430497)
|
Deep-Palm: 0.90
|
|
| 351 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.97
|
|
| 364 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.96
|
|
| 382 | - | - |
LNCaP
(31251020)
Unknown
(32651440)
cerebral cortex
(36430497)
|
GPS-Palm: 0.76
Deep-Palm: 0.98
|
|
| 436 | - | - |
cerebral cortex
(36430497)
|
GPS-Palm: 0.88
Deep-Palm: 0.94
|
|
| 525 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.44
|
|
| 563 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.98
|
|
| 590 | - | - | - |
Deep-Palm: 0.24
|
|
| 612 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.94
|
|
| 711 | SWISSPALM DBPTM CYSMODDB | - | - |
LNCaP
(31251020)
cerebral cortex
(36430497)
|
GPS-Palm: 0.94
Deep-Palm: 0.92
|
| 815 | - | - | - |
Deep-Palm: 0.98
|
|
| 924 | - | - | - |
Deep-Palm: 0.08
|
|
| 996 | - | - | - |
Deep-Palm: 0.46
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
LNCaP
Specificity: 1.000
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 100 | F → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 113 | W → C | 0.002294 | SNP | Missense Mutation | OV |
| 186 | M → Cfs*41 | 0.003460 | DEL | Frame Shift Del | CESC |
| 316 | A → Cfs*27 | 0.001969 | INS | Frame Shift Ins | HNSC |
| 351 | C → R | 0.001887 | SNP | Missense Mutation | UCEC |
| 393 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 577 | F → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 612 | C → F | 0.001764 | SNP | Missense Mutation | LUAD |
| 613 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 656 | I → _P657insMAGTECCESTW | 0.002294 | INS | In Frame Ins | OV |
| 722 | G → C | 0.002506 | SNP | Missense Mutation | COAD |
| 854 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 876 | F → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 891 | G → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 893 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 900 | Y → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 924 | C → F | 0.001764 | SNP | Missense Mutation | LUAD |
| 946 | R → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 947 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 1000 | Y → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 1016 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1016 | R → C | 0.003460 | SNP | Missense Mutation | CESC |