Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q14566 | MCM6 | DNA replication licensing factor MCM6 … | Homo sapiens (Human) | 821 aa |
Protein Details: Q14566 (MCM6)
Protein Information
| Accession | Q14566 |
|---|---|
| Protein Names | DNA replication licensing factor MCM6 (EC 3.6.4.12) (p105MCM) |
| Gene Symbol | MCM6 |
| Organism | Homo sapiens (Human) |
| Length | 821 aa |
| Isoforms | No isoforms |
| Related PMIDs | 24357059 29733200 31251020 31382980 32944167 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDLAAAAEPG11AGSQHLEVRD21EVAEKCQKLF31LDFLEEFQSS41DGEIKYLQLA
51-10051EELIRPERNT61LVVSFVDLEQ71FNQQLSTTIQ81EEFYRVYPYL91CRALKTFVKD
101-150101RKEIPLAKDF111YVAFQDLPTR121HKIRELTSSR131IGLLTRISGQ141VVRTHPVHPE
151-200151LVSGTFLCLD161CQTVIRDVEQ171QFKYTQPNIC181RNPVCANRRR191FLLDTNKSRF
201-250201VDFQKVRIQE211TQAELPRGSI221PRSLEVILRA231EAVESAQAGD241KCDFTGTLIV
251-300251VPDVSKLSTP261GARAETNSRV271SGVDGYETEG281IRGLRALGVR291DLSYRLVFLA
301-350301CCVAPTNPRF311GGKELRDEEQ321TAESIKNQMT331VKEWEKVFEM341SQDKNLYHNL
351-400351CTSLFPTIHG361NDEVKRGVLL371MLFGGVPKTT381GEGTSLRGDI391NVCIVGDPST
401-450401AKSQFLKHVE411EFSPRAVYTS421GKASSAAGLT431AAVVRDEESH441EFVIEAGALM
451-500451LADNGVCCID461EFDKMDVRDQ471VAIHEAMEQQ481TISITKAGVK491ATLNARTSIL
501-550501AAANPISGHY511DRSKSLKQNI521NLSAPIMSRF531DLFFILVDEC541NEVTDYAIAR
551-600551RIVDLHSRIE561ESIDRVYSLD571DIRRYLLFAR581QFKPKISKES591EDFIVEQYKH
601-650601LRQRDGSGVT611KSSWRITVRQ621LESMIRLSEA631MARMHCCDEV641QPKHVKEAFR
651-700651LLNKSIIRVE661TPDVNLDQEE671EIQMEVDEGA681GGINGHADSP691APVNGINGYN
701-750701EDINQESAPK711ASLRLGFSEY721CRISNLIVLH731LRKVEEEEDE741SALKRSELVN
751-800751WYLKEIESEI761DSEEELINKK771RIIEKVIHRL781THYDHVLIEL791TQAGLKGSTE
801-821801GSESYEEDPY811LVVNPNYLLE821D
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 26 | - | - | - |
Deep-Palm: 0.91
|
|
| 91 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.92
|
|
| 158 | - |
HeLa
(37611173)
| - |
Deep-Palm: 0.47
|
|
| 161 | - |
HeLa
(37611173)
| - |
GPS-Palm: 0.85
Deep-Palm: 0.45
|
|
| 180 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.25
|
|
| 185 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.17
|
|
| 242 | - | - | - |
Deep-Palm: 0.97
|
|
| 301 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.97
|
|
| 302 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.96
|
|
| 351 | - | - | - |
Deep-Palm: 0.37
|
|
| 393 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.94
|
|
| 457 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.88
|
|
| 458 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.93
|
|
| 540 | - | - | - |
Deep-Palm: 0.59
|
|
| 636 | - | - | - |
GPS-Palm: 0.69
Deep-Palm: 0.79
|
|
| 637 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.75
|
|
| 721 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.95
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.375
3
PC3
Specificity: 0.375
3/3 (100.0%)
1
LNCaP
Specificity: 0.125
1/1 (100.0%)
1
HAP1 cell
Specificity: 0.125
1/1 (100.0%)
1
U937 cell
Specificity: 0.125
1/1 (100.0%)
1
293T cell
Specificity: 0.125
1/1 (100.0%)
1
HUVECs
Specificity: 0.125
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 101 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 207 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 551 | R → C | 0.005618 | SNP | Missense Mutation | PAAD |
| 565 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 626 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 658 | R → C | 0.005618 | SNP | Missense Mutation | PAAD |
| 679 | G → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 707 | S → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 724 | S → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 301* | C → ? | 0.002288 | SNP | Nonsense Mutation | STAD |