Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q15012 | LAPTM4A | Lysosomal-associated transmembrane protein 4A (Golgi … | Homo sapiens (Human) | 233 aa |
Protein Details: Q15012 (LAPTM4A)
Protein Information
| Accession | Q15012 |
|---|---|
| Protein Names | Lysosomal-associated transmembrane protein 4A (Golgi 4-transmembrane-spanning transporter MTP) |
| Gene Symbol | LAPTM4A |
| Organism | Homo sapiens (Human) |
| Length | 233 aa |
| Isoforms | No isoforms |
| Related PMIDs | 24357059 29733200 32944167 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MVSMSFKRNR11SDRFYSTRCC21GCCHVRTGTI31ILGTWYMVVN41LLMAILLTVE
51-10051VTHPNSMPAV61NIQYEVIGNY71YSSERMADNA81CVLFAVSVLM91FIISSMLVYG
101-150101AISYQVGWLI111PFFCYRLFDF121VLSCLVAISS131LTYLPRIKEY141LDQLPDFPYK
151-200151DDLLALDSSC161LLFIVLVFFA171LFIIFKAYLI181NCVWNCYKYI191NNRNVPEIAV
201-233201YPAFEAPPQY211VLPTYEMAVK221MPEKEPPPPY231LPA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 19 | SWISSPALM DBPTM CYSMODDB | Lysosomal-associated transmembrane transporter | - | - |
Deep-Palm: 0.75
|
| 20 | SWISSPALM DBPTM CYSMODDB | Lysosomal-associated transmembrane transporter | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.71
|
| 22 | SWISSPALM DBPTM CYSMODDB | Lysosomal-associated transmembrane transporter | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.52
|
| 23 | SWISSPALM DBPTM CYSMODDB | Lysosomal-associated transmembrane transporter | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.51
|
| 81 | - | - | - |
Deep-Palm: 0.13
|
|
| 114 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.62
|
|
| 124 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.87
|
|
| 160 | - | - | - |
Deep-Palm: 0.59
|
|
| 182 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.03
|
|
| 186 | - | - | - |
Deep-Palm: 0.05
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
PC3
Specificity: 0.600
3/3 (100.0%)
1
HAP1 cell
Specificity: 0.200
1/1 (100.0%)
1
HUVECs
Specificity: 0.200
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.