Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q16585 | SGCB | Beta-sarcoglycan (Beta-SG) (43 kDa dystrophin-associated … | Homo sapiens (Human) | 318 aa |
Protein Details: Q16585 (SGCB)
Protein Information
| Accession | Q16585 |
|---|---|
| Protein Names | Beta-sarcoglycan (Beta-SG) (43 kDa dystrophin-associated glycoprotein) (43DAG) (A3b) |
| Gene Symbol | SGCB |
| Organism | Homo sapiens (Human) |
| Length | 318 aa |
| Isoforms | No isoforms |
| Related PMIDs | 33636221 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAAAAAAAE11QQSSNGPVKK21SMREKAVERR31SVNKEHNSNF41KAGYIPIDED
51-10051RLHKTGLRGR61KGNLAICVII71LLFILAVINL81IITLVIWAVI91RIGPNGCDSM
101-150101EFHESGLLRF111KQVSDMGVIH121PLYKSTVGGR131RNENLVITGN141NQPIVFQQGT
151-200151TKLSVENNKT161SITSDIGMQF171FDPRTQNILF181STDYETHEFH191LPSGVKSLNV
201-250201QKASTERITS211NATSDLNIKV221DGRAIVRGNE231GVFIMGKTIE241FHMGGNMELK
251-300251AENSIILNGS261VMVSTTRLPS271SSSGDQLGSG281DWVRYKLCMC291ADGTLFKVQV
301-318301TSQNMGCQIS311DNPCGNTH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 67 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.95
|
|
| 97 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.70
|
|
| 288 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.73
|
|
| 290 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.48
|
|
| 307 | - | - | - |
Deep-Palm: 0.01
|
|
| 314 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.01
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
heart
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 67 | C → F | 0.007299 | SNP | Missense Mutation | READ |
| 223 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 223 | R → C | 0.002506 | SNP | Missense Mutation | COAD |