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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
Q16658 FSCN1; FAN1; HSN; SNL Fascin (55 kDa actin-bundling protein) … Homo sapiens (Human) 493 aa

Protein Details: Q16658 (FSCN1)

Protein Information
Accession Q16658
Protein Names Fascin (55 kDa actin-bundling protein) (Singed-like protein) (p55)
Gene Symbol FSCN1; FAN1; HSN; SNL
Organism Homo sapiens (Human)
Length 493 aa
Isoforms No isoforms
Related PMIDs 22496122 29575903 29733200 32944167 36430497 37611173
Database Sources CysModDB dbPTM SwissPalm
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.417
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
10
HAP1 cells
Specificity: 0.417
10/10 (100.0%)
4
PC3 cells
Specificity: 0.167
4/4 (100.0%)
4
293T cells
Specificity: 0.167
4/10 (40.0%)
4
Cerebral cortex
Specificity: 0.167
4/4 (100.0%)
1
HeLa cells
Specificity: 0.042
1/1 (100.0%)
1
Endothelial cells
Specificity: 0.042
1/2 (50.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
LNCaP cells
Specificity: 0.000
0/46 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MTANGTAEAV11QIQFGLINCG21NKYLTAEAFG31FKVNASASSL41KKKQIWTLEQ
51-10051PPDEAGSAAV61CLRSHLGRYL71AADKDGNVTC81EREVPGPDCR91FLIVAHDDGR
101-150101WSLQSEAHRR111YFGGTEDRLS121CFAQTVSPAE131KWSVHIAMHP141QVNIYSVTRK
151-200151RYAHLSARPA161DEIAVDRDVP171WGVDSLITLA181FQDQRYSVQT191ADHRFLRHDG
201-250201RLVARPEPAT211GYTLEFRSGK221VAFRDCEGRY231LAPSGPSGTL241KAGKATKVGK
251-300251DELFALEQSC261AQVVLQAANE271RNVSTRQGMD281LSANQDEETD291QETFQLEIDR
301-350301DTKKCAFRTH311TGKYWTLTAT321GGVQSTASSK331NASCYFDIEW341RDRRITLRAS
351-400351NGKFVTSKKN361GQLAASVETA371GDSELFLMKL381INRPIIVFRG391EHGFIGCRKV
401-450401TGTLDANRSS411YDVFQLEFND421GAYNIKDSTG431KYWTVGSDSA441VTSSGDTPVD
451-493451FFFEFCDYNK461VAIKVGGRYL471KGDHAGVLKA481SAETVDPASL491WEY
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
19 Prediction (Low) - -
61 Prediction (High) - -
121 Experimental CYSMODDB SWISSPALM DBPTM Fascin domain 29575903
226 Prediction (Low) - -
260 Experimental CYSMODDB SWISSPALM DBPTM Prediction (Low) - 29575903, 37611173
397 Prediction (Low) - -
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
47 C → R 0.002545 SNP Missense Mutation GBM
68 R → C 0.002288 SNP Missense Mutation STAD
100 R → C 0.002427 SNP Missense Mutation BLCA
220 S → C 0.002427 SNP Missense Mutation BLCA
300 R → C 0.002427 SNP Missense Mutation BLCA
308 V → Cfs*5 0.001014 DEL Frame Shift Del BRCA
383 R → C 0.002506 SNP Missense Mutation COAD
398 R → C 0.002506 SNP Missense Mutation COAD
456 C → C 0.001014 SNP Silent BRCA
468 R → C 0.002545 SNP Missense Mutation GBM
468 R → C 0.001887 SNP Missense Mutation UCEC
469 Y → C 0.002545 SNP Missense Mutation GBM
743 R → C 0.001887 SNP Missense Mutation UCEC
812 C → Y 0.002288 SNP Missense Mutation STAD
824 R → C 0.001887 SNP Missense Mutation UCEC
833 G → C 0.002033 SNP Missense Mutation LUSC
944 C → C 0.002506 SNP Silent COAD
954 C → C 0.001887 SNP Silent UCEC
1004 C → C 0.002545 SNP Silent GBM