Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q16695 | H3-4 | Histone H3.1t (H3/t) (H3t) (H3/g) … | Homo sapiens (Human) | 136 aa |
Protein Details: Q16695 (H3-4)
Protein Information
| Accession | Q16695 |
|---|---|
| Protein Names | Histone H3.1t (H3/t) (H3t) (H3/g) (Histone H3.4) |
| Gene Symbol | H3-4 |
| Organism | Homo sapiens (Human) |
| Length | 136 aa |
| Isoforms | No isoforms |
| Related PMIDs | 25914232 31251020 36430497 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MARTKQTARK11STGGKAPRKQ21LATKVARKSA31PATGGVKKPH41RYRPGTVALR
51-10051EIRRYQKSTE61LLIRKLPFQR71LMREIAQDFK81TDLRFQSSAV91MALQEACESY
101-136101LVGLFEDTNL111CVIHAKRVTI121MPKDIQLARR131IRGERA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 97 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.88
|
|
| 111 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.83
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
4
cerebral cortex
Specificity: 0.500
4/4 (100.0%)
3
LNCaP
Specificity: 0.375
3/3 (100.0%)
1
CEM 174 cell
Specificity: 0.125
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.