Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q3TIR3 | Ric8a | Chaperone Ric-8A (Synembryn-A) | Mus musculus (Mouse) | 530 aa |
Protein Details: Q3TIR3 (Ric8a)
Protein Information
| Accession | Q3TIR3 |
|---|---|
| Protein Names | Chaperone Ric-8A (Synembryn-A) |
| Gene Symbol | Ric8a |
| Organism | Mus musculus (Mouse) |
| Length | 530 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MEPRAVADAL11ETGEEDAVTE21ALRSFNREHS31QSFTFDDAQQ41EDRKRLAKLL
51-10051VSVLEQGLSP61KHRVTWLQTI71RILSRDRSCL81DSFASRQSLH91ALACYADITV
101-150101SEEPIPQSPD111MDVLLESLKC121LCNLVLSSPT131AQMLAAEARL141VVRLAERVGL
151-200151YRKRSYPHEV161QFFDLRLLFL171LTALRTDVRQ181QLFQELHGVR191LLTDALELTL
201-250201GVAPKENPPV211MLPAQETERA221MEILKVLFNI231TFDSVKREVD241EEDAALYRYL
251-300251GTLLRHCVMV261EAAGDRTEEF271HGHTVNLLGN281LPLKCLDVLL291ALELHEGSLE
301-350301FMGVNMDVIS311ALLAFLEKRL321HQTHRLKECV331APVLNVLTEC341ARMHRPARKF
351-400351LKAQVLPPLR361DVRTRPEVGD371LLRNKLVRLM381THLDTDVKRV391AAEFLFVLCS
401-450401ESVPRFIKYT411GYGNAAGLLA421ARGLMAGGRP431EGQYSEDEDT441DTEEYREAKA
451-500451SINPVTGRVE461EKPPNPMEGM471TEEQKEHEAM481KLVNMFDKLS491RHRVIQPMGM
501-530501SPRGHLTSLQ511DAMCETMEGQ521LSSDPDSDPD
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 79 | - | - | - |
Deep-Palm: 0.95
|
|
| 94 | - | - | - |
Deep-Palm: 0.85
|
|
| 120 | - | - | - |
Deep-Palm: 0.95
|
|
| 122 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
Deep-Palm: 0.95
|
| 257 | - | - | - |
Deep-Palm: 0.98
|
|
| 285 | - | - | - |
Deep-Palm: 0.98
|
|
| 329 | - | - | - |
Deep-Palm: 0.96
|
|
| 340 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.96
|
|
| 399 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.88
|
|
| 514 | - | - | - |
Deep-Palm: 0.59
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Testis
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.