Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q3TIU4 | Pde12 | 2',5'-phosphodiesterase 12 (2'-PDE) (2-PDE) (EC … | Mus musculus (Mouse) | 608 aa |
Protein Details: Q3TIU4 (Pde12)
Protein Information
| Accession | Q3TIU4 |
|---|---|
| Protein Names | 2',5'-phosphodiesterase 12 (2'-PDE) (2-PDE) (EC 3.1.4.-) (Mitochondrial deadenylase) (EC 3.1.13.4) |
| Gene Symbol | Pde12 |
| Organism | Mus musculus (Mouse) |
| Length | 608 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 37925639 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MWRLPGRSAL11RGVRSVVERR21SRAEAGTHEA31VRAMERAVVR41CVPSEPKLSL
51-10051SFALADGSHK61NMQRDQSEPL71GRALSRIATN81ALKGHAKVAA91AKKSRKNRAH
101-150101SSGGAACEAT111GPEPVATCEP121VVKLYYREEA131VAEDVLNVDA141WQDGAVLQIG
151-200151DVKYKVERNP161PTFTELQLPR171YIMAGFPVCP181KLGVEFGDPA191SSVFRWYKEV
201-250201KPGAAEPGDS211GPASSSHSSQ221PSAWIETGVD231ERVYTPCNAD241IGLRLRLHCT
251-300251PGNGQRFGPS261RELESLCPVE271AGPGTCTFDH281RHLYTKKVTE291DSFIRTVSYN
301-350301ILADTYAQTE311FSRTVLYPYC321APYALELDYR331QNLIQKELTG341YNADLICLQE
351-400351VDRAVFSDSL361VPALEAFGLE371GVFRIKQHEG381LATFYRKSKF391RLLSQHDISF
401-450401QEALKSDPLH411KELLEKLALN421PLAQEKVLQR431SSVLQISVLQ441STTDSSKKIC
451-500451VANTHLYWHP461KGGYIRLIQM471EVALVHIRHV481SRDLYPGIPV491IFCGDFNSTP
501-550501STGMYHFVIS511GSIAEDHEDW521ASNGEEERCS531MPLSHCFKLK541SACGEPAYTN
551-600551YVGGFHGCLD561YIFIDLNTLE571VEQVIPLPSH581EEVTTHQALP591SVSHPSDHIA
601-608601LVCDLKWK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 41 | - | - | - |
Deep-Palm: 0.98
|
|
| 107 | - | - | - |
Deep-Palm: 0.93
|
|
| 118 | - | - | - |
Deep-Palm: 0.90
|
|
| 179 | - | - | - |
Deep-Palm: 0.88
|
|
| 237 | - |
MLE
(39008777)
| - |
Deep-Palm: 0.72
|
|
| 249 | - | - | - |
Deep-Palm: 0.88
|
|
| 267 | - | - | - |
Deep-Palm: 0.85
|
|
| 276 | - | - | - |
Deep-Palm: 0.90
|
|
| 320 | - | - | - |
Deep-Palm: 0.61
|
|
| 347 | - | - | - |
Deep-Palm: 0.88
|
|
| 450 | - | - | - |
Deep-Palm: 0.46
|
|
| 493 | - | - | - |
Deep-Palm: 0.05
|
|
| 529 | - | - | - |
Deep-Palm: 0.58
|
|
| 536 | - | - | - |
Deep-Palm: 0.79
|
|
| 543 | - | - | - |
Deep-Palm: 0.33
|
|
| 558 | - | - | - |
Deep-Palm: 0.23
|
|
| 603 | - | - | - |
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Testis
Specificity: 0.667
2/2 (100.0%)
1
Liver
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.