Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q3TN26 | Slc27a1 | Arachidonate--CoA ligase (EC 6.2.1.15) (EC … | Mus musculus (Mouse) | 629 aa |
Protein Details: Q3TN26 (Slc27a1)
Protein Information
| Accession | Q3TN26 |
|---|---|
| Protein Names | Arachidonate--CoA ligase (EC 6.2.1.15) (EC 6.2.1.3) (Long-chain-fatty-acid--CoA ligase) |
| Gene Symbol | Slc27a1 |
| Organism | Mus musculus (Mouse) |
| Length | 629 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLLASRYQPL11KDPLLDLCCP21GAPEVTGSSG31QWPCLCLCSG41LSVLIRVRLE
51-10051LRRHRRAGDT61IPCIFQAVAR71RQPERLALVD81ASSGICWTFA91QLDTYSNAVA
101-150101NLFRQLGFAP111GDVVAVFLEG121RPEFVGLWLG131LAKAGVVAAL141LNVNLRREPL
151-200151AFCLGTSAAK161ALIYGGEMAA171AVAEVSEQLG181KSLLKFCSGD191LGPESILPDT
201-250201QLLDPMLAEA211PTTPLAQAPG221KGMDDRLFYI231YTSGTTGLPK241AAIVVHSRYY
251-300251RIAAFGHHSY261SMRAADVLYD271CLPLYHSAGN281IMGVGQCVIY291GLTVVLRKKF
301-350301SASRFWDDCV311KYNCTVVQYI321GEICRYLLRQ331PVRDVEQRHR341VRLAVGNGLR
351-400351PAIWEEFTQR361FGVPQIGEFY371GATECNCSIA381NMDGKVGSCG391FNSRILTHVY
401-450401PIRLVKVNED411TMEPLRDSEG421LCIPCQPGEP431GLLVGQINQQ441DPLRRFDGYV
451-500451SDSATNKKIA461HSVFRKGDSA471YLSGDVLVMD481ELGYMYFRDR491SGDTFRWRGE
501-550501NVSTTEVEAV511LSRLLGQTDV521AVYGVAVPGV531EGKAGMAAIA541DPHSQLDPNS
551-600551MYQELQKVLA561SYARPIFLRL571LPQVDTTGTF581KIQKTRLQRE591GFDPRQTSDR
601-629601LFFLDLKQGR611YLPLDERVHA621RICAGDFSL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 18 | - | - | - |
Deep-Palm: 0.98
|
|
| 19 | - | - | - |
Deep-Palm: 0.96
|
|
| 34 | - | - | - |
Deep-Palm: 0.95
|
|
| 36 | - | - | - |
Deep-Palm: 0.96
|
|
| 38 | - | - | - |
Deep-Palm: 0.97
|
|
| 63 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.98
|
|
| 86 | - | - | - |
Deep-Palm: 0.97
|
|
| 153 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.97
|
|
| 187 | - | - | - |
Deep-Palm: 0.98
|
|
| 271 | - | - | - |
Deep-Palm: 0.38
|
|
| 287 | - | - | - |
Deep-Palm: 0.76
|
|
| 309 | - | - | - |
Deep-Palm: 0.16
|
|
| 314 | - | - | - |
Deep-Palm: 0.13
|
|
| 324 | - | - | - |
Deep-Palm: 0.13
|
|
| 375 | - | - | - |
Deep-Palm: 0.51
|
|
| 377 | - | - | - |
Deep-Palm: 0.10
|
|
| 389 | - | - | - |
Deep-Palm: 0.14
|
|
| 422 | - | - | - |
Deep-Palm: 0.94
|
|
| 425 | - | - | - |
Deep-Palm: 0.91
|
|
| 623 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.06
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.