Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q3TNA1 | Xylb | Xylulose kinase (Xylulokinase) (EC 2.7.1.17) | Mus musculus (Mouse) | 551 aa |
Protein Details: Q3TNA1 (Xylb)
Protein Information
| Accession | Q3TNA1 |
|---|---|
| Protein Names | Xylulose kinase (Xylulokinase) (EC 2.7.1.17) |
| Gene Symbol | Xylb |
| Organism | Mus musculus (Mouse) |
| Length | 551 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDARTHRRAA11GTPRALAERA21GRRCCLGWDF31STQQVKVVAV41DAELNVFYED
51-10051SVHFDRDLPE61FGTQGGVHVH71KDRLTVTSPV81LMWVQALDLI91LGKMKSSGFD
101-150101FSQVLALSGA111GQQHGSVYWK121TGASLALSSL131SPALPLHQQL141QSCFSISDCP
151-200151IWMDSSTTAQ161CHQLEAAVGG171AQALSCLTGS181RAYERFTGNQ191IAKLFQKNPE
201-250201AYSHSERISL211VSSFAASLFL221GGYSPIDYSD231GSGMNLLQIQ241EKVWSQACLD
251-300251VCAPHLEEKL261GSPVPSCSVV271GTISSYYVQR281YGFPPGCKVV291AFSGDNPASL
301-350301AGMRLEEGDI311AVSLGTSDTL321FLWLQKPMPA331LEGHIFCNPV341DPQHYMALLC
351-400351FKNGSLMREK361IRDESASCSW371NKFSKALKST381AMGNNGNLGF391YFDVMEITPE
401-450401IIGRHRFNAE411NMEVSAFPGD421VEIRALIEGQ431FMAKRIHAEG441LGYRVMPKTK
451-500451ILATGGASHN461KDILQVLADV471FGAPVYVIDT481TSSACVGSAY491RAFHGLAGGT
501-550501GVAFSEVVKS511APQPSLAATP521NPGASQVYAA531LLPRYSALEQ541RILSTAQRPL
551-551551E
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 24 | - | - | - |
Deep-Palm: 0.98
|
|
| 25 | - | - | - |
Deep-Palm: 0.97
|
|
| 143 | - | - | - |
Deep-Palm: 0.61
|
|
| 149 | - | - | - |
Deep-Palm: 0.04
|
|
| 161 | - | - | - |
Deep-Palm: 0.46
|
|
| 176 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.97
|
|
| 248 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.90
|
| 252 | - |
Liver
(28526873)
| - |
Deep-Palm: 0.76
|
|
| 267 | - | - | - |
Deep-Palm: 0.96
|
|
| 287 | - | - | - |
Deep-Palm: 0.92
|
|
| 337 | - | - | - |
Deep-Palm: 0.13
|
|
| 350 | - | - | - |
Deep-Palm: 0.40
|
|
| 368 | - | - | - |
Deep-Palm: 0.71
|
|
| 485 | - | - | - |
Deep-Palm: 0.88
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
6
Liver
Specificity: 0.750
6/6 (100.0%)
2
Testis
Specificity: 0.250
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.